RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 TUBB2BQ9BVA1 445 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 TUBGCP4Q9UGJ1 667 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 EFCAB8A8MWE9 144 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 GZMAP12544 262 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 AXLP30530 894 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 PTGISQ16647 500 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 NAA35Q5VZE5 725 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 DAAM2Q86T65 1068 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 RNF180Q86T96 592 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 RSPH3Q86UC2 560 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 C18orf25Q96B23 403 aaPredicted RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 ZNF653Q96CK0 615 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 OSBPL7Q9BZF2 842 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 SDCBP2Q9H190 292 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 PARP2Q9UGN5 583 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 CNTN6Q9UQ52 1028 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 PDE2AO00408 941 aaPredicted RBP12.79□□□□□ -0.36
SYN3-202ENST00000358763 PPEF2O14830 753 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 CHRNA1P02708 482 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
SYN3-202ENST00000358763 THPOP40225 353 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ZNF132P52740 706 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 MEI1Q5TIA1 1274 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
SYN3-202ENST00000358763 CYFIP2Q96F07 1278 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 HPDLQ96IR7 371 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 RPS6KA5O75582 802 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
SYN3-202ENST00000358763 ACLYP53396 1101 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 GPC5P78333 572 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ACAD10Q6JQN1 1059 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ST3GAL5Q9UNP4 418 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 RALGAPA2Q2PPJ7 1873 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ZNF677Q86XU0 584 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 TAF4BQ92750 862 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 GOLGA1Q92805 767 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
SYN3-202ENST00000358763 HMGXB4Q9UGU5 601 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 IPPQ9Y573 584 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 PTCH2Q9Y6C5 1203 aa12.79□□□□□ -0.36
SYN3-202ENST00000358763 UNGP13051 313 aaPredicted RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 MS4A14Q96JA4 679 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 TCP1P17987 556 aaKnown RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 RBP5P82980 135 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 CD302Q8IX05 232 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 RHOT2Q8IXI1 618 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 NOA1Q8NC60 698 aaKnown RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 SMG8Q8ND04 991 aaKnown RBP12.78□□□□□ -0.36
SYN3-202ENST00000358763 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 SCN1AP35498 2009 aa12.78□□□□□ -0.36
SYN3-202ENST00000358763 GRK4P32298 578 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 SESTD1Q86VW0 696 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 TFAP2BQ92481 460 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 BTBD6Q96KE9 485 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 TWNKQ96RR1 684 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 NUP85Q9BW27 656 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 AGO3Q9H9G7 860 aaKnown RBP12.77□□□□□ -0.36
SYN3-202ENST00000358763 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.36
SYN3-202ENST00000358763 CNTN3Q9P232 1028 aa12.77□□□□□ -0.36
SYN3-202ENST00000358763 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.36
SYN3-202ENST00000358763 MEIS3P2A8K0S8 358 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 KIF4AO95239 1232 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 GNRH1P01148 92 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
SYN3-202ENST00000358763 GHRP10912 638 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 CD19P15391 556 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 ATICP31939 592 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 NSFP46459 744 aaKnown RBP12.77□□□□□ -0.37
SYN3-202ENST00000358763 NOMO3P69849 1222 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 MGAT3Q09327 533 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 RPS6KA1Q15418 735 aa12.77□□□□□ -0.37
SYN3-202ENST00000358763 LHX8Q68G74 356 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms