RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SCOCQ9UIL1 159 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 MYH14Q7Z406 1995 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 IGKV6D-41A0A0C4DH26 115 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 UNC5CO95185 931 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ENO1P06733 434 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MMP10P09238 476 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CETPP11597 493 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TAC1P20366 129 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TAS2R40P59535 323 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TFAMQ00059 246 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 BNIP1Q12981 228 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PRKG1Q13976 671 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MTFR1Q15390 333 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 IL31RAQ8NI17 732 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC110Q8TBZ0 833 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM143Q96AN5 459 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TRIM11Q96F44 468 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ZNF570Q96NI8 536 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TBC1D10AQ9BXI6 508 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TRIM4Q9C037 500 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM8AQ9HCN3 771 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ARMCX1Q9P291 453 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TBX20Q9UMR3 447 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ITGB4P16144 1822 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MYH11P35749 1972 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 C2orf71A6NGG8 1288 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 NVLO15381 856 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 LPXNO60711 386 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CYP3A4P08684 503 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ZCCHC18P0CG32 403 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 SKIP12755 728 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PSMA2P25787 234 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 NPTX2P47972 431 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TMPRSS15P98073 1019 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 KLC1Q07866 573 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ORC1Q13415 861 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CLEC16AQ2KHT3 1053 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MIS18BP1Q6P0N0 1132 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MCOLN2Q8IZK6 566 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PDIK1LQ8N165 341 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PARD3BQ8TEW8 1205 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 JDP2Q8WYK2 163 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 SHCBP1LQ9BZQ2 653 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 GPR88Q9GZN0 384 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 STOML1Q9UBI4 398 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 NKX1-2Q9UD57 310 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 G3BP2Q9UN86 482 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MAGED2Q9UNF1 606 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ZBTB12Q9Y330 459 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC88AQ3V6T2 1871 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 H0YIN7 160 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CAPN9O14815 690 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ATP5HO75947 161 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MARK3P27448 753 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 SLC8A3P57103 927 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ALCAMQ13740 583 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TFDP1Q14186 410 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 PPP2R5DQ14738 602 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 EFTUD2Q15029 972 aaKnown RBP eCLIP6.94□□□□□ -1.31e-9■□□□□ 8.8
CSDE1-203ENST00000358528 RBBP5Q15291 538 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 DARS2Q6PI48 645 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MFSD7Q6UXD7 560 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CRELD2Q6UXH1 353 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 GPD1LQ8N335 351 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 ZNF526Q8TF50 670 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC124Q96CT7 223 aaKnown RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 FAM111AQ96PZ2 611 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 TAAR1Q96RJ0 339 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 MSTO1Q9BUK6 570 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 GLIS2Q9BZE0 524 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-203ENST00000358528 LRRC19Q9H756 370 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 DOCK2Q92608 1830 aa6.94□□□□□ -1.3
CSDE1-203ENST00000358528 K7ERI5 159 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TOM1L1O75674 476 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PGM1P36871 562 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 EPHB1P54762 984 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ARL4CP56559 192 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ZNF268Q14587 947 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SPDYCQ5MJ68 293 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 FAXCQ5TGI0 409 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ISLR2Q6UXK2 745 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 EEPD1Q7L9B9 569 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PODNQ7Z5L7 613 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 LARGE2Q8N3Y3 721 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 KCTD6Q8NC69 237 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 FBXO41Q8TF61 875 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PPP1R16BQ96T49 567 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TSSK1BQ9BXA7 367 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 KIAA1586Q9HCI6 787 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ZMYND8Q9ULU4 1186 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 IGLV3-22A0A075B6J6 115 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 WDR64B1ANS9 1081 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 H3BRJ5 948 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms