RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LRRC36Q1X8D7 754 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 FAAH2Q6GMR7 532 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ANKMY2Q8IV38 441 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SHCBP1Q8NEM2 672 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SLC9A7Q96T83 725 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 AOX1Q06278 1338 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ABCB1P08183 1280 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 SESN2P58004 480 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 TNIP3Q96KP6 325 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CYP39A1Q9NYL5 469 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CRLS1Q9UJA2 301 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 MTMR6Q9Y217 621 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 A0A087WUV0 522 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 HEATR9A2RTY3 570 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 MYL4P12829 197 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ARL4CP56559 192 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 VSNL1P62760 191 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 C6orf118Q5T5N4 469 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CYP4A22Q5TCH4 519 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ADAM22Q9P0K1 906 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 TPD52L2O43399 206 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 SFSWAPQ12872 951 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 STARD3Q14849 445 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 TAF5Q15542 800 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ZSWIM7Q19AV6 140 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ASPRV1Q53RT3 343 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ULK3Q6PHR2 472 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SETD3Q86TU7 594 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 TSPAN14Q8NG11 270 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 RBM41Q96IZ5 413 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 HOXC10Q9NYD6 342 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SAE1Q9UBE0 346 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 PCDHA4Q9UN74 947 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 PIPSLA2A3N6 862 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 CDC40O60508 579 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHD3-202ENST00000358181 GH2P01242 217 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 MBL2P11226 248 aaPredicted RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 MAPKAPK2P49137 400 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 MARK2Q7KZI7 788 aaKnown RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 IDI2Q9BXS1 227 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 CIPCQ9C0C6 399 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 ARHGEF38Q9NXL2 777 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 MARK1Q9P0L2 795 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 ADD2P35612 726 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 KAT2BQ92831 832 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 NARS2Q96I59 477 aaKnown RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 ZNF512BQ96KM6 892 aaPredicted RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 STK33Q9BYT3 514 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 APOL1O14791 398 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 ZW10O43264 779 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 TRIM3O75382 744 aaPredicted RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 KRT37O76014 449 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 PLA2G4BP0C869 781 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 TCEA1P23193 301 aaKnown RBP10.21□□□□□ -0.77
CHD3-202ENST00000358181 SERPINB10P48595 397 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 PPP2R2CQ9Y2T4 447 aa10.21□□□□□ -0.77
CHD3-202ENST00000358181 YWHABP31946 246 aaKnown RBP10.21□□□□□ -0.78
CHD3-202ENST00000358181 ARHGEF25Q86VW2 580 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 CCDC103Q8IW40 242 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 RTKN2Q8IZC4 609 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 KDM6BO15054 1643 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 CHRNA5P30532 468 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 NUGGCQ68CJ6 796 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 TLK2Q86UE8 772 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 PHACTR1Q9C0D0 580 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 SPTLC3Q9NUV7 552 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 PCMTD2Q9NV79 361 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.21□□□□□ -0.78
CHD3-202ENST00000358181 DLGAP3O95886 979 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 FOXP4Q8IVH2 680 aaPredicted RBP10.21□□□□□ -0.78
CHD3-202ENST00000358181 TUBB6Q9BUF5 446 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 CINPQ9BW66 212 aaPredicted RBP10.21□□□□□ -0.78
CHD3-202ENST00000358181 CYLDQ9NQC7 956 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 AAASQ9NRG9 546 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 TNFSF13BQ9Y275 285 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 JRKLQ9Y4A0 524 aa10.21□□□□□ -0.78
CHD3-202ENST00000358181 CARMIL3Q8ND23 1372 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 NPHP4O75161 1426 aaPredicted RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 RASA4BC9J798 803 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 KCNN4O15554 427 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RASA4O43374 803 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GUCY1A3Q02108 690 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 RBL2Q08999 1139 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GPS1Q13098 491 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 GIMAP8Q8ND71 665 aaPredicted RBP10.2□□□□□ -0.78
CHD3-202ENST00000358181 PITPNM3Q9BZ71 974 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 AFF2P51816 1311 aa10.2□□□□□ -0.78
CHD3-202ENST00000358181 ZBTB22O15209 634 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms