RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
CCNE1-202ENST00000357943 SPG21Q9NZD8 308 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 RWDD3Q9Y3V2 267 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 EYSQ5T1H1 3165 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 C5orf67F2Z3F1 127 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 AP5Z1O43299 807 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 FGF18O76093 207 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 CLSTN1O94985 981 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 SLC9A1P19634 815 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 ATICP31939 592 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 UBASH3AP57075 661 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 UBXN1Q04323 297 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 KCNMA1Q12791 1236 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 MYO1EQ12965 1108 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 EXOC3L4Q17RC7 722 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 SGSM1Q2NKQ1 1148 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 WDR72Q3MJ13 1102 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 SV2CQ496J9 727 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 FUT10Q6P4F1 479 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 TMEM169Q96HH4 297 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 VN1R3Q9BXE9 311 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 VRTNQ9H8Y1 702 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 IFNKQ9P0W0 207 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 SNX9Q9Y5X1 595 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 SCN1AP35498 2009 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 KIAA1671Q9BY89 1806 aa15.98■□□□□ 0.15
CCNE1-202ENST00000357943 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 SOX1O00570 391 aaPredicted RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 STAU1O95793 577 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 EFEMP2O95967 443 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 PPM1AP35813 382 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 NOP14P78316 857 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 APBA1Q02410 837 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 LRMPQ12912 555 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 NR1I3Q14994 352 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 FILIP1LQ4L180 1135 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 FKBP15Q5T1M5 1219 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 GBP6Q6ZN66 633 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 TAS1R1Q7RTX1 841 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 EHBP1Q8NDI1 1231 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 PLVAPQ9BX97 442 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 IMPG2Q9BZV3 1241 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 INTS2Q9H0H0 1204 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 ALG13Q9NP73 1137 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 NXF1Q9UBU9 619 aaKnown RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 SF3B1O75533 1304 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 CARNS1A5YM72 827 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 PON1P27169 355 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 KLK7P49862 253 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 PLCB3Q01970 1234 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 ARNTL2Q8WYA1 636 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 TATDN2Q93075 761 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 SUSD3Q96L08 255 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 SENP8Q96LD8 212 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 SAMD11Q96NU1 681 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 GDAP2Q9NXN4 497 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 POLIQ9UNA4 740 aa15.97■□□□□ 0.15
CCNE1-202ENST00000357943 TIMM13Q9Y5L4 95 aaPredicted RBP15.97■□□□□ 0.15
CCNE1-202ENST00000357943 TRANK1O15050 2925 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 M0QZQ0 153 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 CYB561D2O14569 222 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 RB1P06400 928 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 KRT17Q04695 432 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 ZNF667Q5HYK9 610 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 WDR44Q5JSH3 913 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 FAM171A1Q5VUB5 890 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 TRIM65Q6PJ69 517 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 RNF168Q8IYW5 571 aaPredicted RBP15.96■□□□□ 0.15
CCNE1-202ENST00000357943 CCDC150Q8NCX0 1101 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 TAF4BQ92750 862 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 B3GALT6Q96L58 329 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
CCNE1-202ENST00000357943 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
CCNE1-202ENST00000357943 EPOPA6NHQ4 379 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 TKTP29401 623 aaKnown RBP15.95■□□□□ 0.14
CCNE1-202ENST00000357943 SYCP1Q15431 976 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 PHLDB3Q6NSJ2 640 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 DPY19L2P1Q6NXN4 242 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 SCARA5Q6ZMJ2 495 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 DDX53Q86TM3 631 aaKnown RBP15.95■□□□□ 0.14
CCNE1-202ENST00000357943 FBXO22Q8NEZ5 403 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 SPPL3Q8TCT6 385 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 LRCH3Q96II8 777 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 MMS19Q96T76 1030 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 C11orf84Q9BUA3 381 aaPredicted RBP15.95■□□□□ 0.14
CCNE1-202ENST00000357943 SIK3Q9Y2K2 1263 aa15.95■□□□□ 0.14
CCNE1-202ENST00000357943 XIRP2A4UGR9 3374 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 H3BNC9 293 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 GRM6O15303 877 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SOD2P04179 222 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 PAX3P23760 479 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 DNAJB1P25685 340 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 DEKP35659 375 aaKnown RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ASPAP45381 313 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 TNNC1P63316 161 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms