RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 GLIS1Q8NBF1 620 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 ZNF606Q8WXB4 792 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 CHMP6Q96FZ7 201 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 SNF8Q96H20 258 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 MTMR12Q9C0I1 747 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 NEU2Q9Y3R4 380 aa26.53■■□□□ 1.84
HDGF-201ENST00000357325 ADCY8P40145 1251 aa26.52■■□□□ 1.84
HDGF-201ENST00000357325 PLEKHA7Q6IQ23 1121 aa26.52■■□□□ 1.84
HDGF-201ENST00000357325 YTHDF3Q7Z739 585 aaKnown RBP26.52■■□□□ 1.84
HDGF-201ENST00000357325 FAM81BQ96LP2 452 aa26.52■■□□□ 1.84
HDGF-201ENST00000357325 FAM189A1O60320 539 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 AGTP01019 485 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 PDE4CQ08493 712 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 ZNF252P-AS1Q0IIN9 211 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 LRRC14Q15048 493 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 KAZNQ674X7 775 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 TXNRD3NBQ6F5E7 133 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 SLFN12LQ6IEE8 588 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 KCNV1Q6PIU1 500 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 CDR2LQ86X02 465 aaPredicted RBP26.51■■□□□ 1.84
HDGF-201ENST00000357325 CABS1Q96KC9 395 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 TMEM109Q9BVC6 243 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 OSBPL8Q9BZF1 889 aa26.51■■□□□ 1.84
HDGF-201ENST00000357325 SIP14410 1827 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 POLR2AP24928 1970 aaKnown RBP26.51■■□□□ 1.83
HDGF-201ENST00000357325 DNM1LO00429 736 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 ADCY3O60266 1144 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 ATP2C2O75185 946 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 GJB1P08034 283 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 SRGAP2CP0DJJ0 459 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 BRD2P25440 801 aaKnown RBP26.51■■□□□ 1.83
HDGF-201ENST00000357325 MYL6P60660 151 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 APOBEC3FQ8IUX4 373 aaKnown RBP26.51■■□□□ 1.83
HDGF-201ENST00000357325 LRRC71Q8N4P6 559 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 TRIM11Q96F44 468 aa26.51■■□□□ 1.83
HDGF-201ENST00000357325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.51■■□□□ 1.83
HDGF-201ENST00000357325 USP2O75604 605 aaPredicted RBP26.5■■□□□ 1.83
HDGF-201ENST00000357325 FSBPO95073 299 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 ITIH2P19823 946 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 TCF7P36402 384 aaPredicted RBP26.5■■□□□ 1.83
HDGF-201ENST00000357325 STAT5BP51692 787 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 LIN9Q5TKA1 542 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 PHF13Q86YI8 300 aaPredicted RBP26.5■■□□□ 1.83
HDGF-201ENST00000357325 RHOT1Q8IXI2 618 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 LRRC34Q8IZ02 419 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.5■■□□□ 1.831e-10■□□□□ 9.7
HDGF-201ENST00000357325 MLXIPLQ9NP71 852 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 CNTN6Q9UQ52 1028 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 ARIH2O95376 493 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 ITGBL1O95965 494 aaPredicted RBP26.5■■□□□ 1.83
HDGF-201ENST00000357325 CETPP11597 493 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 OGDHQ02218 1023 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 VGLL4Q14135 290 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 DNERQ8NFT8 737 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 ATL2Q8NHH9 583 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 MGARPQ8TDB4 240 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 CENPTQ96BT3 561 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 TCHPQ9BT92 498 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 INTS9Q9NV88 658 aaKnown RBP26.5■■□□□ 1.83
HDGF-201ENST00000357325 SNCAIPQ9Y6H5 919 aa26.5■■□□□ 1.83
HDGF-201ENST00000357325 ATF2P15336 505 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 TMEM63BQ5T3F8 832 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 LBX2Q6XYB7 198 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 CACNA2D3Q8IZS8 1091 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 IPO4Q8TEX9 1081 aaKnown RBP26.49■■□□□ 1.83
HDGF-201ENST00000357325 MSCO60682 206 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 PSMC4P43686 418 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 SCARA5Q6ZMJ2 495 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 TRMT10CQ7L0Y3 403 aaKnown RBP26.49■■□□□ 1.83
HDGF-201ENST00000357325 NCAPG2Q86XI2 1143 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 CYP4X1Q8N118 509 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 FEZF2Q8TBJ5 459 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 SCLT1Q96NL6 688 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 ANAPC5Q9UJX4 755 aa26.49■■□□□ 1.83
HDGF-201ENST00000357325 F8VP50 259 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 LDHAP00338 332 aaKnown RBP26.48■■□□□ 1.83
HDGF-201ENST00000357325 WEE2P0C1S8 567 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 ZSCAN5DPP0CG00 497 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 OSTNP61366 133 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 CCDC13Q8IYE1 715 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 UBR7Q8N806 425 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 NINJ2Q9NZG7 142 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 GGA2Q9UJY4 613 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 WDR90Q96KV7 1748 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 PSTPIP1O43586 416 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 ETS1P14921 441 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 ZNF132P52740 706 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 CNGA2Q16280 664 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 GKAP1Q5VSY0 366 aaPredicted RBP26.48■■□□□ 1.83
HDGF-201ENST00000357325 KATNAL2Q8IYT4 538 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 CHST13Q8NET6 341 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.48■■□□□ 1.83
HDGF-201ENST00000357325 C9orf72Q96LT7 481 aa26.48■■□□□ 1.83
HDGF-201ENST00000357325 FHDC1Q9C0D6 1143 aaPredicted RBP26.48■■□□□ 1.83
HDGF-201ENST00000357325 TTC4O95801 387 aa26.47■■□□□ 1.83
HDGF-201ENST00000357325 MMP8P22894 467 aa26.47■■□□□ 1.83
HDGF-201ENST00000357325 ACTN3Q08043 901 aaPredicted RBP26.47■■□□□ 1.83
HDGF-201ENST00000357325 HSDL1Q3SXM5 330 aa26.47■■□□□ 1.83
HDGF-201ENST00000357325 WDTC1Q8N5D0 677 aa26.47■■□□□ 1.83
HDGF-201ENST00000357325 C3orf20Q8ND61 904 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms