RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 UPP2O95045 317 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PLEKHA8P1O95397 391 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PADI6Q6TGC4 694 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 GPR141Q7Z602 305 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 XXYLT1Q8NBI6 393 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 LATS2Q9NRM7 1088 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 WDR62O43379 1518 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NFIBO00712 420 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PHF2O75151 1096 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 FKBP6O75344 327 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NDUFS3O75489 264 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 STX3Q13277 289 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 ARHGEF7Q14155 803 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 SLC18A3Q16572 532 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 MTHFD1LQ6UB35 978 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 SPATA16Q9BXB7 569 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PRR23AA6NEV1 266 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 TADA2AO75478 443 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 RFX3P48380 749 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 HSD17B4P51659 736 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 YTHDF3Q7Z739 585 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NDEL1Q9GZM8 345 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 RERGLQ9H628 205 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 HOXC10Q9NYD6 342 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 HDAC6Q9UBN7 1215 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 GGA2Q9UJY4 613 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 A0A1W2PQJ5 194 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 USP17L5A8MUK1 530 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NAIF1Q69YI7 327 aaPredicted RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 CHSY1Q86X52 802 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 BTBD7Q9P203 1132 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NCK2O43639 380 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 MCPH1Q8NEM0 835 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 EXOSC4Q9NPD3 245 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NSMCE4AQ9NXX6 385 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 BFARQ9NZS9 450 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 NUP153P49790 1475 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 CDK17Q00537 523 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 SFR1Q86XK3 245 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 SIKE1Q9BRV8 207 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 PRRG1O14668 218 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 APRTP07741 180 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 TRMT5Q32P41 509 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 PHF20L1A8MW92 1017 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 RNF103O00237 685 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 RASGRF1Q13972 1273 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 MAPRE1Q15691 268 aaKnown RBP12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 MTERF3Q96E29 417 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 ATAD3AQ9NVI7 634 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 RBAKQ9NYW8 714 aaPredicted RBP12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 GABBR1Q9UBS5 961 aa12.02□□□□□ -0.48
SPTBN1-202ENST00000356805 CCDC81Q6ZN84 652 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 BBS2Q9BXC9 721 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 BBOX1O75936 387 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 PLA2G4AP47712 749 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 PLOD1Q02809 727 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 SCN3BQ9NY72 215 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 KANSL1LA0AUZ9 987 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 C21orf2O43822 256 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 RXRBP28702 533 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 TRIM48Q8IWZ4 208 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 RAET1EQ8TD07 263 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 SYN2Q92777 582 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 VPS50Q96JG6 964 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 C20orf96Q9NUD7 363 aaPredicted RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 RALBP11234 206 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 CCDC103Q8IW40 242 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 UVRAGQ9P2Y5 699 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 ZDHHC9Q9Y397 364 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 ERBB3P21860 1342 aa12.02□□□□□ -0.49
SPTBN1-202ENST00000356805 CRELD2Q6UXH1 353 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 VN1R5Q7Z5H4 357 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 RSPH1Q8WYR4 309 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ATP5BP06576 529 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ASNSP08243 561 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms