RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ACTRT1Q8TDG2 376 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 TMEM40Q8WWA1 233 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 ZNF606Q8WXB4 792 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 C2CD2Q9Y426 696 aa27.42■■□□□ 1.98
CLK2-201ENST00000355560 DDX3YO15523 660 aaKnown RBP27.41■■□□□ 1.98
CLK2-201ENST00000355560 NOGQ13253 232 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 GNASQ5JWF2 1037 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 LRRC1Q9BTT6 524 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 ERLIN1O75477 346 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 GNAT1P11488 350 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 SNX17Q15036 470 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 HNRNPLLQ8WVV9 542 aaKnown RBP27.41■■□□□ 1.98
CLK2-201ENST00000355560 TRIM11Q96F44 468 aa27.41■■□□□ 1.98
CLK2-201ENST00000355560 EIF2AQ9BY44 585 aaKnown RBP27.41■■□□□ 1.98
CLK2-201ENST00000355560 PGRMC1O00264 195 aaKnown RBP27.4■■□□□ 1.98
CLK2-201ENST00000355560 AOC2O75106 756 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 MYBL1P10243 752 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 HOXC8P31273 242 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 GJA9P57773 515 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 YWHAEP62258 255 aaKnown RBP27.4■■□□□ 1.98
CLK2-201ENST00000355560 MON1BQ7L1V2 547 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 BTBD6Q96KE9 485 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 NOC2LQ9Y3T9 749 aaKnown RBP27.4■■□□□ 1.98
CLK2-201ENST00000355560 PGK1P00558 417 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 RRM1P23921 792 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 POLR2BP30876 1174 aaKnown RBP27.4■■□□□ 1.98
CLK2-201ENST00000355560 RAP1GAPP47736 663 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 GUCY2FP51841 1108 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 C2CD6Q53TS8 623 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 BCO2Q9BYV7 579 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 SNTG2Q9NY99 539 aa27.4■■□□□ 1.98
CLK2-201ENST00000355560 COMTP21964 271 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 MCM3P25205 808 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 BRD2P25440 801 aaKnown RBP27.39■■□□□ 1.98
CLK2-201ENST00000355560 C8orf74Q6P047 294 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 NT5DC4Q86YG4 428 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 CD302Q8IX05 232 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 RASGEF1CQ8N431 466 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 KIF12Q96FN5 646 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.39■■□□□ 1.982e-9■■■□□ 15.1
CLK2-201ENST00000355560 C11orf70Q9BRQ4 267 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 AVENQ9NQS1 362 aaPredicted RBP27.39■■□□□ 1.98
CLK2-201ENST00000355560 RALGAPA2Q2PPJ7 1873 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 TRIP11Q15643 1979 aa27.39■■□□□ 1.98
CLK2-201ENST00000355560 KPNA6O60684 536 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 ZMYND10O75800 440 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 ATICP31939 592 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 TRIM32Q13049 653 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 DCAF12L1Q5VU92 463 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 ITGA11Q9UKX5 1188 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 PIN4Q9Y237 131 aaKnown RBP27.38■■□□□ 1.97
CLK2-201ENST00000355560 MRPS25P82663 173 aaKnown RBP27.38■■□□□ 1.97
CLK2-201ENST00000355560 LONRF2Q1L5Z9 754 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 CXCL17Q6UXB2 119 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 HDAC7Q8WUI4 952 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 RPS6KC1Q96S38 1066 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 MTG1Q9BT17 334 aaPredicted RBP27.38■■□□□ 1.97
CLK2-201ENST00000355560 TRIM6Q9C030 488 aaPredicted RBP27.38■■□□□ 1.97
CLK2-201ENST00000355560 CARD9Q9H257 536 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 DPP3Q9NY33 737 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 HES2Q9Y543 173 aa27.38■■□□□ 1.97
CLK2-201ENST00000355560 MIF4GDA9UHW6 222 aaKnown RBP27.37■■□□□ 1.97
CLK2-201ENST00000355560 CAP1Q01518 475 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 ALG3Q92685 438 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 FAXDC2Q96IV6 333 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 ZSWIM1Q9BR11 485 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 VRTNQ9H8Y1 702 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 ADAM22Q9P0K1 906 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 ANAPC7Q9UJX3 599 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 TMEM59LQ9UK28 342 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 AGAP1Q9UPQ3 857 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 CASP8AP2Q9UKL3 1982 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 SCN10AQ9Y5Y9 1956 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 SEPT4O43236 478 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 RARBP10826 455 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 AXLP30530 894 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 BEND6Q5SZJ8 279 aaPredicted RBP27.37■■□□□ 1.97
CLK2-201ENST00000355560 LLGL2Q6P1M3 1020 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 PHLDB2Q86SQ0 1253 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 PHF13Q86YI8 300 aaPredicted RBP27.37■■□□□ 1.97
CLK2-201ENST00000355560 HPDLQ96IR7 371 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 SMYD3Q9H7B4 428 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 PLEKHA5Q9HAU0 1116 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 SPC25Q9HBM1 224 aa27.37■■□□□ 1.97
CLK2-201ENST00000355560 YARSP54577 528 aaKnown RBP27.36■■□□□ 1.97
CLK2-201ENST00000355560 CDH8P55286 799 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 PPP1R2P3Q6NXS1 205 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 NME8Q8N427 588 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 UBL4BQ8N7F7 174 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 KRT35Q92764 455 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 SNX27Q96L92 541 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 SDCBP2Q9H190 292 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 UPF3AQ9H1J1 476 aaKnown RBP27.36■■□□□ 1.97
CLK2-201ENST00000355560 CXCL16Q9H2A7 254 aa27.36■■□□□ 1.97
CLK2-201ENST00000355560 NXF3Q9H4D5 531 aaKnown RBP27.36■■□□□ 1.97
CLK2-201ENST00000355560 DMGDHQ9UI17 866 aaKnown RBP27.36■■□□□ 1.97
CLK2-201ENST00000355560 SPOPO43791 374 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 CRYBB1P53674 252 aaPredicted RBP27.35■■□□□ 1.97
CLK2-201ENST00000355560 SLC7A5Q01650 507 aa27.35■■□□□ 1.97
CLK2-201ENST00000355560 CACNB2Q08289 660 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms