RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 LATS2Q9NRM7 1088 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 PCDHA10Q9Y5I2 948 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 SPAG6O75602 509 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 NCALDP61601 193 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 PIGHQ14442 188 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-201ENST00000355497 SLC18A3Q16572 532 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 MFSD14CQ5VZR4 134 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 SIRT2Q8IXJ6 389 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 HES6Q96HZ4 224 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 RGL1Q9NZL6 768 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 EFL1Q7Z2Z2 1120 aaKnown RBP15.58■□□□□ 0.08
LMX1B-201ENST00000355497 PRPF39Q86UA1 669 aaKnown RBP15.58■□□□□ 0.08
LMX1B-201ENST00000355497 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 VPS50Q96JG6 964 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 RBBP8Q99708 897 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 ZCWPW1Q9H0M4 648 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 DCP1AQ9NPI6 582 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-201ENST00000355497 DTNAQ9Y4J8 743 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 WEE2P0C1S8 567 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 PDGFRAP16234 1089 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 PRDX5P30044 214 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 SHC4Q6S5L8 630 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 TRPM8Q7Z2W7 1104 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 SPATA16Q9BXB7 569 aa15.58■□□□□ 0.08
LMX1B-201ENST00000355497 C21orf2O43822 256 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 UBTFL6P0CB48 400 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 SOX11P35716 441 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 HSPA13P48723 471 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 CENPAP49450 140 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 NAA30Q147X3 362 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 LVRNQ6Q4G3 990 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 SLC30A5Q8TAD4 765 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 MCEEQ96PE7 176 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 HPS4Q9NQG7 708 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 B2RBV5 119 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 NFIBO00712 420 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 MTFR1Q15390 333 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 CYFIP2Q96F07 1278 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 BBS2Q9BXC9 721 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 TMEM117Q9H0C3 514 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 C6orf203Q9P0P8 240 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 NMT1P30419 496 aaKnown RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 RPS6P62753 249 aaKnown RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 MTF1Q14872 753 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 WDR72Q3MJ13 1102 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 UBXN8O00124 270 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 TRAPPC3O43617 180 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 RAB14P61106 215 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 TP53BP2Q13625 1128 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 SNX17Q15036 470 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 CLEC4GQ6UXB4 293 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 RNF149Q8NC42 400 aa15.57■□□□□ 0.08
LMX1B-201ENST00000355497 LBHD1Q9BQE6 289 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-201ENST00000355497 ASB14A6NK59 587 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 FAM196BA6NMK8 535 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 RASSF9O75901 435 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 BRD2P25440 801 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 RGS4P49798 205 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PSMD7P51665 324 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 RBP5P82980 135 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 ARHGEF7Q14155 803 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SLC44A5Q8NCS7 719 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 WNK4Q96J92 1243 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 C10orf88Q9H8K7 445 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 GEMIN8Q9NWZ8 242 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 AGAP1Q9UPQ3 857 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PIN4Q9Y237 131 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 LRRIQ3A6PVS8 624 aaPredicted RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 TNPO2O14787 897 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 FOXN1O15353 648 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 RGS7P49802 495 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SCFD2Q8WU76 684 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 FOXP3Q9BZS1 431 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 ROPN1BQ9BZX4 212 aaPredicted RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 MUC3BQ9H195 1237 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 ROPN1Q9HAT0 212 aaPredicted RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PAK5Q9P286 719 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 CHMP2BQ9UQN3 213 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 CDY2AQ9Y6F7 541 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 CDY1Q9Y6F8 540 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 ENO4A6NNW6 628 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 POLBP06746 335 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 CHMP1BQ7LBR1 199 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 MICU2Q8IYU8 434 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SYNDIG1Q9H7V2 258 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 IL1RL2Q9HB29 575 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 DGKIO75912 1065 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 SNRPAP09012 282 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 IL31Q6EBC2 164 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 APOBEC3FQ8IUX4 373 aaKnown RBP15.56■□□□□ 0.08
LMX1B-201ENST00000355497 MANSC1Q9H8J5 431 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 KIF28PB7ZC32 967 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 RNF103O00237 685 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 FDX1P10109 184 aa15.56■□□□□ 0.08
LMX1B-201ENST00000355497 PTRHD1Q6GMV3 140 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms