RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CNKSR2Q8WXI2 1034 aa23.67■■□□□ 1.38
NKX2-1-201ENST00000354822 IP6K2Q9UHH9 426 aa23.67■■□□□ 1.38
NKX2-1-201ENST00000354822 ANKRD65E5RJM6 399 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 TLR3O15455 904 aaKnown RBP23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 MEFVO15553 781 aaPredicted RBP23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 SNX1Q13596 522 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 CDCA2Q69YH5 1023 aaPredicted RBP23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 PHLDB2Q86SQ0 1253 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 TADA2BQ86TJ2 420 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 PASD1Q8IV76 773 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 UBR7Q8N806 425 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 RAPGEF5Q92565 580 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 CCDC113Q9H0I3 377 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 C2orf40Q9H1Z8 148 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 CHST7Q9NS84 486 aa23.66■■□□□ 1.38
NKX2-1-201ENST00000354822 TLDC2A0PJX2 215 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 LSM8O95777 96 aaKnown RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 KLF1Q13351 362 aaPredicted RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 DUOXA2Q1HG44 320 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 SGSM1Q2NKQ1 1148 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 MMS22LQ6ZRQ5 1243 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 CCDC50Q8IVM0 306 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 BBOF1Q8ND07 529 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 ACO2Q99798 780 aaKnown RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 JPH2Q9BR39 696 aaPredicted RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 OGTO15294 1046 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 SLC25A27O95847 323 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 CALB1P05937 261 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 CFHP08603 1231 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 HARSP12081 509 aaKnown RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 MMP8P22894 467 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 MMP13P45452 471 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 IRX3P78415 501 aaPredicted RBP23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 MAPK6Q16659 721 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 C2CD6Q53TS8 623 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 GADL1Q6ZQY3 521 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 LRRC4CQ9HCJ2 640 aa23.65■■□□□ 1.38
NKX2-1-201ENST00000354822 RASGRF2O14827 1237 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 FAM189A1O60320 539 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 FGFR4P22455 802 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 ZNF568Q3ZCX4 644 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 RHBDF2Q6PJF5 856 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 PLPPR4Q7Z2D5 763 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 OTUD6BQ8N6M0 293 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 TRAIPQ9BWF2 469 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 ZNF518BQ9C0D4 1074 aa23.64■■□□□ 1.38
NKX2-1-201ENST00000354822 LGR5O75473 907 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 CST3P01034 146 aaPredicted RBP23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 RALAP11233 206 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 MCL1Q07820 350 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 LAMTOR4Q0VGL1 99 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 LLGL1Q15334 1064 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 ERMARDQ5T6L9 678 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 MFSD5Q6N075 450 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 LLGL2Q6P1M3 1020 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 SCLT1Q96NL6 688 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 OSBPL8Q9BZF1 889 aa23.64■■□□□ 1.37
NKX2-1-201ENST00000354822 A0A0G2JLL6 359 aaPredicted RBP23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 CPP00450 1065 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 IVDP26440 423 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 DRP2Q13474 957 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 LY6KQ17RY6 165 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 SEZ6Q53EL9 994 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 TNFAIP8L3Q5GJ75 292 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 PRRT2Q7Z6L0 340 aaPredicted RBP23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 CCDC89Q8N998 374 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
NKX2-1-201ENST00000354822 IGKV6-21A0A0C4DH24 114 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 C5orf60A6NFR6 353 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 PRKCBP05771 671 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 ATF2P15336 505 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 LMNB2Q03252 620 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TAOK1Q7L7X3 1001 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 ZBTB33Q86T24 672 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 CCDC25Q86WR0 208 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 RCOR2Q8IZ40 523 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 ATG4AQ8WYN0 398 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 NIF3L1Q9GZT8 377 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 IRF6O14896 467 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TP73O15350 636 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 SRGAP2CP0DJJ0 459 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TNFSF9P41273 254 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TAS2R40P59535 323 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TAP1Q03518 808 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TRPC3Q13507 836 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 ERO1BQ86YB8 467 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 TMEM35BQ8NCS4 154 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 CCDC114Q96M63 670 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 XPO6Q96QU8 1125 aaKnown RBP23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 GPR20Q99678 358 aa23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 CPSF3Q9UKF6 684 aaKnown RBP23.62■■□□□ 1.37
NKX2-1-201ENST00000354822 NOP56O00567 594 aaKnown RBP23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 PEX10O60683 326 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 ADCY8P40145 1251 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 CELF3Q5SZQ8 465 aaKnown RBP23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 LRRC38Q5VT99 294 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 ZNF365Q70YC5 407 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 RNF149Q8NC42 400 aa23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 RBM41Q96IZ5 413 aaKnown RBP23.61■■□□□ 1.37
NKX2-1-201ENST00000354822 HERPUD2Q9BSE4 406 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms