RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PSMC4P43686 418 aa20.77■□□□□ 0.91
COL13A1-201ENST00000354547 NOP14P78316 857 aaKnown RBP20.77■□□□□ 0.91
COL13A1-201ENST00000354547 PLCB4Q15147 1175 aa20.77■□□□□ 0.91
COL13A1-201ENST00000354547 XKR3Q5GH77 459 aa20.77■□□□□ 0.91
COL13A1-201ENST00000354547 THOC1Q96FV9 657 aaKnown RBP20.77■□□□□ 0.91
COL13A1-201ENST00000354547 FAM81BQ96LP2 452 aa20.77■□□□□ 0.91
COL13A1-201ENST00000354547 CYP39A1Q9NYL5 469 aa20.77■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF214Q9UL59 606 aaPredicted RBP20.77■□□□□ 0.91
COL13A1-201ENST00000354547 POTEJP0CG39 1038 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 FDX1P10109 184 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 CNTN2Q02246 1040 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 TBC1D1Q86TI0 1168 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-201ENST00000354547 PARP9Q8IXQ6 854 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF280CQ8ND82 737 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 MAIP1Q8WWC4 291 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 FHDC1Q9C0D6 1143 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-201ENST00000354547 KDM4CQ9H3R0 1056 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF148Q9UQR1 794 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 DKC1O60832 514 aaKnown RBP eCLIP20.76■□□□□ 0.91
COL13A1-201ENST00000354547 ZC3H11AO75152 810 aaKnown RBP eCLIP20.76■□□□□ 0.91
COL13A1-201ENST00000354547 MYBL1P10243 752 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 TCP11Q8WWU5 503 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 TRIM11Q96F44 468 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 SERPINB12Q96P63 405 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF302Q9NR11 478 aa20.76■□□□□ 0.91
COL13A1-201ENST00000354547 CST3P01034 146 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 TNFSF9P41273 254 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SCARA5Q6ZMJ2 495 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 TRPM8Q7Z2W7 1104 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 PNMA8AQ86V59 439 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SLCO2A1Q92959 643 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SENP7Q9BQF6 1050 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 NSRP1Q9H0G5 558 aaKnown RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 NAALADL1Q9UQQ1 740 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SUPT20HL2P0C7V6 817 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 PLCB3Q01970 1234 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 MTM1Q13496 603 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 E2F5Q15329 346 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 TMED2Q15363 201 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SUPT20HL1Q3ZLR7 823 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 TNFAIP8L3Q5GJ75 292 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 DNPEPQ9ULA0 475 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 MAFGO15525 162 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 CLTAP09496 248 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 RDXP35241 583 aaKnown RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 KLF1Q13351 362 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 NCOA4Q13772 614 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF568Q3ZCX4 644 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 LACTB2Q53H82 288 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF677Q86XU0 584 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 SLC7A3Q8WY07 619 aa20.75■□□□□ 0.91
COL13A1-201ENST00000354547 RBM15Q96T37 977 aaKnown RBP eCLIP20.75■□□□□ 0.91
COL13A1-201ENST00000354547 F8VP50 259 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 IFNB1P01574 187 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 GMPSP49915 693 aaPredicted RBP20.74■□□□□ 0.91
COL13A1-201ENST00000354547 TXNRD3NBQ6F5E7 133 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 MCEEQ96PE7 176 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 MRPL47Q9HD33 250 aaKnown RBP20.74■□□□□ 0.91
COL13A1-201ENST00000354547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL13A1-201ENST00000354547 POC1B-GALNT4F8VUJ3 575 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 SPAG7O75391 227 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 KRT1P04264 644 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 PTPRAP18433 802 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 BRD2P25440 801 aaKnown RBP20.74■□□□□ 0.91
COL13A1-201ENST00000354547 STX2P32856 288 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 SNCBQ16143 134 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF606Q8WXB4 792 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 SGSM3Q96HU1 749 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 C10orf88Q9H8K7 445 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 KIAA1586Q9HCI6 787 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 SAYSD1Q9NPB0 183 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 BAIAP2L1Q9UHR4 511 aa20.74■□□□□ 0.91
COL13A1-201ENST00000354547 SNX3O60493 162 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 RXRBP28702 533 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 MAN1A1P33908 653 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 NFX1Q12986 1120 aaKnown RBP20.73■□□□□ 0.91
COL13A1-201ENST00000354547 CCNG2Q16589 344 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 DCUN1D2Q6PH85 259 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 MFSD7Q6UXD7 560 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 CCDC89Q8N998 374 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 TPX2Q9ULW0 747 aaKnown RBP20.73■□□□□ 0.91
COL13A1-201ENST00000354547 IVNS1ABPQ9Y6Y0 642 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 PSME4Q14997 1843 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 GOLGA8SH3BPF8 625 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 GOLGA8MH3BSY2 632 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 UBOX5O94941 541 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 OSTNP61366 133 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 DYNLT1P63172 113 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 FAM182AQ5T1J6 154 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 CYP4A22Q5TCH4 519 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 XRRA1Q6P2D8 792 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 FAM47EQ6ZV65 393 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 FEZF2Q8TBJ5 459 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 ACAD9Q9H845 621 aa20.73■□□□□ 0.91
COL13A1-201ENST00000354547 MYH9P35579 1960 aaKnown RBP20.73■□□□□ 0.91
COL13A1-201ENST00000354547 PIAS1O75925 651 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms