RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 FOXN3O00409 490 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 RARRES1P49788 294 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 BFSP2Q13515 415 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 MAML1Q92585 1016 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 TTI1O43156 1089 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 GPD1P21695 349 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 GTF2A1P52655 376 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 SMTNL2Q2TAL5 461 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 CD302Q8IX05 232 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 CDC26Q8NHZ8 85 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 SCG3Q8WXD2 468 aaKnown RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 L3MBTL3Q96JM7 780 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 COLEC11Q9BWP8 271 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 A0A087WUV0 522 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 ATG16L1Q676U5 607 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 PNMA5Q96PV4 448 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 PLEKP08567 350 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-201ENST00000353479 NCAM1P13591 858 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 ADCYAP1R1P41586 468 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 NIPA1Q7RTP0 329 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 CEP120Q8N960 986 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 STKLD1Q8NE28 680 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 CGRRF1Q99675 332 aa15.69■□□□□ 0.1
COL17A1-201ENST00000353479 KPNA6O60684 536 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 SGPL1O95470 568 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 HSPA4LO95757 839 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 LMNTD2Q8IXW0 634 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 REPS2Q8NFH8 660 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 SYN2Q92777 582 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TACO1Q9BSH4 297 aaKnown RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TRPA1O75762 1119 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 ALDH1A3P47895 512 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 ACOT1Q86TX2 421 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 FAM118BQ9BPY3 351 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 LRRC1Q9BTT6 524 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 EHD2Q9NZN4 543 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 HACD3Q9P035 362 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TFR2Q9UP52 801 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 AKAP3O75969 853 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 AKR1A1P14550 325 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 NCF2P19878 526 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TMPRSS15P98073 1019 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 ACVR2BQ13705 512 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 NAA30Q147X3 362 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 NCAPHQ15003 741 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 EFHC1Q5JVL4 640 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 SOCS4Q8WXH5 440 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 EML1O00423 815 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 SESN2P58004 480 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-201ENST00000353479 DGKZQ13574 1117 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TMTC4Q5T4D3 741 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 TAS2R42Q7RTR8 314 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 ATPAF2Q8N5M1 289 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 GOLPH3Q9H4A6 298 aa15.68■□□□□ 0.1
COL17A1-201ENST00000353479 FGFR4P22455 802 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 YWHAHQ04917 246 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 CYP24A1Q07973 514 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 DBN1Q16643 649 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ATP11CQ8NB49 1132 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 FEZF2Q8TBJ5 459 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 E5RI56 91 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 CHEK2O96017 543 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 GGCXP38435 758 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 LIG3P49916 1009 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 LRP10Q7Z4F1 713 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 PABPC5Q96DU9 382 aaKnown RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 TRPV6Q9H1D0 765 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 SUDS3Q9H7L9 328 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 BAG5Q9UL15 447 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ZBTB39O15060 712 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 CXCL8P10145 99 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 RAP1GAPP47736 663 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 POU5F1BQ06416 359 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 SPARCL1Q14515 664 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 MFSD10Q14728 455 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 EPM2AIP1Q7L775 607 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 HASPINQ8TF76 798 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 XPNPEP3Q9NQH7 507 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ALG6Q9Y672 507 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 BAZ2BQ9UIF8 2168 aaKnown RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 UBA6A0AVT1 1052 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 CYB561D2O14569 222 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 SNX2O60749 519 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 ZC3H11AO75152 810 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL17A1-201ENST00000353479 C10orf120Q5SQS8 335 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 CENPPQ6IPU0 288 aa15.67■□□□□ 0.1
COL17A1-201ENST00000353479 THOC1Q96FV9 657 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms