RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 EXTL3O43909 919 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ARIH2O95376 493 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ITGB3P05106 788 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 KRT10P13645 584 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ZNF157P51786 506 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 BPIFB4P59827 614 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 PPP2R2AP63151 447 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 GTF2BQ00403 316 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 PPP2R5DQ14738 602 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 PPP6R3Q5H9R7 873 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ZDHHC24Q6UX98 284 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 LBX2Q6XYB7 198 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 EMC1Q8N766 993 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 MCEEQ96PE7 176 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 CARD9Q9H257 536 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 SLITRK6Q9H5Y7 841 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 PTPRJQ12913 1337 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 CAPSQ13938 189 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 EEF1DP3Q658K8 133 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 MAP4K3Q8IVH8 894 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 MREGQ8N565 214 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 STRA6Q9BX79 667 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 C10orf88Q9H8K7 445 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 SNX9Q9Y5X1 595 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 SGK1O00141 431 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 GAS8O95995 478 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 LDHAP00338 332 aaKnown RBP11.04□□□□□ -0.64
SMPD4-201ENST00000351288 CHN1P15882 459 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 DUPD1Q68J44 220 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 GPAT2Q6NUI2 795 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 VPS37BQ9H9H4 285 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 POLIQ9UNA4 740 aa11.04□□□□□ -0.64
SMPD4-201ENST00000351288 QSER1Q2KHR3 1735 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 NCANO14594 1321 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 POC1B-GALNT4F8VUJ3 575 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 TCF4P15884 667 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 CHKAP35790 457 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 FAM114A2Q9NRY5 505 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 GOLGA6L7A0A1B0GV03 622 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 SPATA31C2B4DYI2 1134 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 M0QYV0 167 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 RARBP10826 455 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 PSMA2P25787 234 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 TWF2Q6IBS0 349 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 FAM71AQ8IYT1 594 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 GDAP1Q8TB36 358 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 TCP11Q8WWU5 503 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 CABS1Q96KC9 395 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 FAM167AQ96KS9 214 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 OSMRQ99650 979 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 ZDHHC18Q9NUE0 388 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 GRHL1Q9NZI5 618 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 INPP5FQ9Y2H2 1132 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 GMNCA6NCL1 334 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 RGS16O15492 202 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 MAPTP10636 758 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 PHKA2P46019 1235 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 KYNUQ16719 465 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 EFCAB13Q8IY85 973 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
SMPD4-201ENST00000351288 PRMT1Q99873 361 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
SMPD4-201ENST00000351288 RPTORQ8N122 1335 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 PHF2O75151 1096 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 ECEL1O95672 775 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 CST3P01034 146 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 ADORA2BP29275 332 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 PEX5P50542 639 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 BEX3Q00994 111 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 KRT17Q04695 432 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 PAN2Q504Q3 1202 aaKnown RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 TDRD10Q5VZ19 366 aaKnown RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 NIPA1Q7RTP0 329 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 SLC13A5Q86YT5 568 aaPredicted RBP11.02□□□□□ -0.64
SMPD4-201ENST00000351288 C9orf72Q96LT7 481 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.64
SMPD4-201ENST00000351288 SLC12A6Q9UHW9 1150 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms