RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 DSG1Q02413 1049 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 PPATQ06203 517 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 Q4G0T1 1027 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 FRMD5Q7Z6J6 570 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 SNF8Q96H20 258 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF395Q9H8N7 513 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 QTRT2Q9H974 415 aaKnown RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ANAPC7Q9UJX3 599 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 APPL1Q9UKG1 709 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 NHSQ6T4R5 1651 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 WFS1O76024 890 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 PDE5AO76074 875 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 RPL13P26373 211 aaKnown RBP16.02■□□□□ 0.16
PTBP1-201ENST00000349038 MAGEA4P43358 317 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 NPEPPSP55786 919 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 UBXN2AP68543 259 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 VPS72Q15906 364 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 TPH2Q8IWU9 490 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 KIAA1586Q9HCI6 787 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 SIX2Q9NPC8 291 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 SLC17A7Q9P2U7 560 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
PTBP1-201ENST00000349038 BOLA2-SMG1P6H3BVE0 249 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.15
PTBP1-201ENST00000349038 EDF1O60869 148 aaKnown RBP16.02■□□□□ 0.15
PTBP1-201ENST00000349038 FAM13AO94988 1023 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 SGPL1O95470 568 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 OATP04181 439 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 MYL2P10916 166 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 KRT5P13647 590 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 VAV1P15498 845 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 RXRBP28702 533 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 MKRN3Q13064 507 aaKnown RBP16.02■□□□□ 0.15
PTBP1-201ENST00000349038 MPP3Q13368 585 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 USH1GQ495M9 461 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 TBC1D9BQ66K14 1250 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 RAPH1Q70E73 1250 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 INPP5DQ92835 1189 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 GRAMD1AQ96CP6 724 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 NSL1Q96IY1 281 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 AGPAT1Q99943 283 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 BLOC1S6Q9UL45 172 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 TRAF3IP3Q9Y228 551 aa16.02■□□□□ 0.15
PTBP1-201ENST00000349038 LMNAP02545 664 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 NELFEP18615 380 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 POLD1P28340 1107 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 JAM2P57087 298 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 DYNLT1P63172 113 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GPC5P78333 572 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 NR1H3Q13133 447 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 PPP1R18Q6NYC8 613 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 C10orf82Q8WW14 230 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 HERPUD2Q9BSE4 406 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 TMEM120AQ9BXJ8 343 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 TRIM55Q9BYV6 548 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GRIP2Q9C0E4 1043 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 H0YIN7 160 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 SORBS2O94875 1100 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 STAMBPO95630 424 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 KRT10P13645 584 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 MMEL1Q495T6 779 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 INTS2Q9H0H0 1204 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 LIN28AQ9H9Z2 209 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 SKIV2L2P42285 1042 aaKnown RBP16.01■□□□□ 0.15
PTBP1-201ENST00000349038 CCR3P51677 355 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 MYL7Q01449 175 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 MED21Q13503 144 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 KIF22Q14807 665 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 TRIP10Q15642 601 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 RIPOR1Q6ZS17 1223 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 GLIS1Q8NBF1 620 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 OLIG1Q8TAK6 271 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 THSD7AQ9UPZ6 1657 aa16.01■□□□□ 0.15
PTBP1-201ENST00000349038 LOC100653049A0A140TA62 436 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 KRT34O76011 436 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 LDHCP07864 332 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 BMP3P12645 472 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 SSTR1P30872 391 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ZNF76P36508 570 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 DLG4P78352 724 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ASPHQ12797 758 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 PEX6Q13608 980 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 RBM44Q6ZP01 1051 aaKnown RBP16■□□□□ 0.15
PTBP1-201ENST00000349038 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
PTBP1-201ENST00000349038 GSDMBQ8TAX9 411 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms