RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SPATA24Q86W54 205 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 MYLK4Q86YV6 388 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 VPS52Q8N1B4 723 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 LARGE2Q8N3Y3 721 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 DTX3LQ8TDB6 740 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ZNF75CPQ92670 426 aaPredicted RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 GJA10Q969M2 543 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 FOXP3Q9BZS1 431 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 KANSL3Q9P2N6 904 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ANKFY1Q9P2R3 1169 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 HSFX1Q9UBD0 423 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ANAPC5Q9UJX4 755 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 TMEM110-MUSTN1A8MSY1 372 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ATP6V1G1O75348 118 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 LGR5O75473 907 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 GZMAP12544 262 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ANPEPP15144 967 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ATF2P15336 505 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 GCAP28676 217 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ABCD1P33897 745 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SULT2A1Q06520 285 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 CETN1Q12798 172 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ALCAMQ13740 583 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 RASA2Q15283 850 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SGO2Q562F6 1265 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PLEKHG4Q58EX7 1191 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 IZUMO2Q6UXV1 221 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 TRIM42Q8IWZ5 723 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SMC6Q96SB8 1091 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 EIF2AK1Q9BQI3 630 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 BHMT2Q9H2M3 363 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 PARVGQ9HBI0 331 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SSU72Q9NP77 194 aaKnown RBP10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 NPHS2Q9NP85 383 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 ZDHHC7Q9NXF8 308 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 TAS2R1Q9NYW7 299 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
CHRNA1-202ENST00000348749 LY75O60449 1722 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 PIK3CDO00329 1044 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 TYROBPO43914 113 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 GAS8O95995 478 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 FTLP02792 175 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 DLATP10515 647 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 ADRA2BP18089 450 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 HOXA10P31260 410 aaPredicted RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 SLC16A2P36021 539 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 BPIFB4P59827 614 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 MYL7Q01449 175 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 THOC5Q13769 683 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 GRM2Q14416 872 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 MESDQ14696 234 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 SLC1A5Q15758 541 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 HHIPL2Q6UWX4 724 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 RINLQ6ZS11 566 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 C1orf186Q6ZWK4 172 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 KCTD1Q719H9 257 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 PDCD7Q8N8D1 485 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 PSPC1Q8WXF1 523 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 SKA1Q96BD8 255 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 CFAP57Q96MR6 1250 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 FNBP1Q96RU3 617 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 RUSC1Q9BVN2 902 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 PPCSQ9HAB8 311 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 KIAA1586Q9HCI6 787 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 SEPT11Q9NVA2 429 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 ETNK2Q9NVF9 386 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 DNAJC17Q9NVM6 304 aaKnown RBP10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 PTTG2Q9NZH5 202 aa10.91□□□□□ -0.66
CHRNA1-202ENST00000348749 CLIC2O15247 247 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MSH4O15457 936 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 PFDN1O60925 122 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 ZBED4O75132 1171 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MAPTP10636 758 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RARBP10826 455 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RPA3P35244 121 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CETN2P41208 172 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RGS2P41220 211 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RPL26P61254 145 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 SNRPFP62306 86 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 HPCAP84074 193 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CDC16Q13042 620 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 KLC3Q6P597 504 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms