RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ARP10275 920 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 PYGMP11217 842 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 CENPCQ03188 943 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 SF3A3Q12874 501 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA1-202ENST00000347617 SPARCL1Q14515 664 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 TMEM132BQ14DG7 1078 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 PGM5Q15124 567 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
HMGA1-202ENST00000347617 OTUD6AQ7L8S5 288 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 SESTD1Q86VW0 696 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 TDRPQ86YL5 185 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 ZDHHC14Q8IZN3 488 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 GDAP1Q8TB36 358 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 CDCA5Q96FF9 252 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 RMDN3Q96TC7 470 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 CCDC28BQ9BUN5 200 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
HMGA1-202ENST00000347617 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 KCNH7Q9NS40 1196 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA1-202ENST00000347617 KCND2Q9NZV8 630 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 ASIC3Q9UHC3 531 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 TRIM33Q9UPN9 1127 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 KCNH4Q9UQ05 1017 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 LRCH1Q9Y2L9 728 aa16.84■□□□□ 0.29
HMGA1-202ENST00000347617 A0A0G2JLL6 359 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-202ENST00000347617 SPDYE16A6NNV3 312 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-202ENST00000347617 ANKRD63C9JTQ0 380 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 EML1O00423 815 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 CLIC2O15247 247 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 SPOPO43791 374 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 ATF2P15336 505 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 PTPN4P29074 926 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 VHLP40337 213 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 MRPS9P82933 396 aaKnown RBP16.83■□□□□ 0.28
HMGA1-202ENST00000347617 SGO2Q562F6 1265 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 SLC45A4Q5BKX6 768 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 PRRT2Q7Z6L0 340 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-202ENST00000347617 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 KCNV2Q8TDN2 545 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 TEKT4Q8WW24 435 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 BICD1Q96G01 975 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 ACAD9Q9H845 621 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 TAS2R14Q9NYV8 317 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 NINJ2Q9NZG7 142 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 GTF3C4Q9UKN8 822 aa16.83■□□□□ 0.28
HMGA1-202ENST00000347617 ZWINTO95229 277 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 SKIP12755 728 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 DYNC1I2Q13409 638 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MOGSQ13724 837 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MESDQ14696 234 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 GPR162Q16538 588 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 LONP2Q86WA8 852 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 ANKLE1Q8NAG6 615 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 ERP27Q96DN0 273 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 DTNBP1Q96EV8 351 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 AGO4Q9HCK5 861 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 EURLQ9NYK6 297 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 NKX1-2Q9UD57 310 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 ANAPC5Q9UJX4 755 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 NAALADL1Q9UQQ1 740 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 RIPK3Q9Y572 518 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 IRF6O14896 467 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 PMM2O15305 246 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 DHX15O43143 795 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 RTN3O95197 1032 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 GNAT1P11488 350 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MARK3P27448 753 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 SSR1P43307 286 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 UBXN2AP68543 259 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 OCRLQ01968 901 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 PPIL2Q13356 520 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 PRKG1Q13976 671 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MPP2Q14168 576 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 RASA2Q15283 850 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MUM1Q2TAK8 710 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 UBAP2Q5T6F2 1119 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 ARHGEF16Q5VV41 709 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 TRIM68Q6AZZ1 485 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 AADACL2Q6P093 401 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
HMGA1-202ENST00000347617 GPRASP2Q96D09 838 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 WNK4Q96J92 1243 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 TTC25Q96NG3 672 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 TBC1D10AQ9BXI6 508 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 FAM192AQ9GZU8 254 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 SCOCQ9UIL1 159 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 CHKBQ9Y259 395 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 PTPN22Q9Y2R2 807 aa16.82■□□□□ 0.28
HMGA1-202ENST00000347617 MYH11P35749 1972 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms