RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 LUC7LQ9NQ29 371 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 CISHQ9NSE2 258 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 KLK14Q9P0G3 267 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 DNAI1Q9UI46 699 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 UBQLN1Q9UMX0 589 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 CITO14578 2027 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 A0A0U1RQF3 1178 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 MEIS3P2A8K0S8 358 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 PIRO00625 290 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 PTGESO14684 152 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 KIF5CO60282 957 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 MYCP01106 439 aaPredicted RBP11.76□□□□□ -0.53
ECM1-201ENST00000346569 MMEP08473 750 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 H2AFZP0C0S5 128 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 WEE2P0C1S8 567 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 FAM189BP81408 668 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 PAK2Q13177 524 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 GPNMBQ14956 572 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 ZNF569Q5MCW4 686 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 SLC39A5Q6ZMH5 540 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 H2AFVQ71UI9 128 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 SLC35F6Q8N357 371 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 LRRC52Q8N7C0 313 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 C18orf25Q96B23 403 aaPredicted RBP11.76□□□□□ -0.53
ECM1-201ENST00000346569 ARMC5Q96C12 935 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 HPDLQ96IR7 371 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
ECM1-201ENST00000346569 APOL6Q9BWW8 343 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 FAM124BQ9H5Z6 455 aaPredicted RBP11.76□□□□□ -0.53
ECM1-201ENST00000346569 CYP3A43Q9HB55 503 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 RNF19AQ9NV58 838 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 TAS2R14Q9NYV8 317 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 POLIQ9UNA4 740 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
ECM1-201ENST00000346569 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 PPEF2O14830 753 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 RTN2O75298 545 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 CALCAP01258 141 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 ITGA4P13612 1032 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 KRT5P13647 590 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
ECM1-201ENST00000346569 LRPAP1P30533 357 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 RAB27AP51159 221 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 GALCP54803 685 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 CDH8P55286 799 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
ECM1-201ENST00000346569 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 C9orf57Q5W0N0 161 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 ANKRD33Q7Z3H0 272 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 ZNF598Q86UK7 904 aaKnown RBP11.75□□□□□ -0.53
ECM1-201ENST00000346569 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 RBBP8NLQ8NC74 664 aaPredicted RBP11.75□□□□□ -0.53
ECM1-201ENST00000346569 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 ADAM2Q99965 735 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 MIOSQ9NXC5 875 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
ECM1-201ENST00000346569 TUBGCP4Q9UGJ1 667 aa11.75□□□□□ -0.53
ECM1-201ENST00000346569 A0A0A6YYK5 440 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 ANKRD62A6NC57 917 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 XPOTO43592 962 aaKnown RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 FTLP02792 175 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 CYP1A1P04798 512 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 TMEM253P0C7T8 217 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 COL6A1P12109 1028 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 UNGP13051 313 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 SELPP16109 830 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 CASQ1P31415 396 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 PDE6CP51160 858 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 SOX4Q06945 474 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 BFSP2Q13515 415 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 TCEAL1Q15170 157 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 GLRA4Q5JXX5 417 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 TAF3Q5VWG9 929 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 FAM43BQ6ZT52 329 aaPredicted RBP11.74□□□□□ -0.53
ECM1-201ENST00000346569 HACE1Q8IYU2 909 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 ZNF592Q92610 1267 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 TOX2Q96NM4 488 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
ECM1-201ENST00000346569 C9IYK1 514 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 INPPL1O15357 1258 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 CILPO75339 1184 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 CFHP08603 1231 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 SKIP12755 728 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 P4HA1P13674 534 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 GNA15P30679 374 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 AFF1P51825 1210 aaKnown RBP11.73□□□□□ -0.53
ECM1-201ENST00000346569 RAD23BP54727 409 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
ECM1-201ENST00000346569 MYO1EQ12965 1108 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms