RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 DCTN4Q9UJW0 460 aa18.85■□□□□ 0.61
VHL-202ENST00000345392 QSER1Q2KHR3 1735 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 SLC16A4O15374 487 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 ETS1P14921 441 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
VHL-202ENST00000345392 NLRP9Q7RTR0 991 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 UCMAQ8WVF2 138 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 MIPEPQ99797 713 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 VPS37BQ9H9H4 285 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 GPRC5CQ9NQ84 441 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 USTQ9Y2C2 406 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.84■□□□□ 0.61
VHL-202ENST00000345392 TCP10L2B9ZVM9 353 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 NPR1P16066 1061 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 TAS2R40P59535 323 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 OVGP1Q12889 678 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 DACT2Q5SW24 774 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 HHATQ5VTY9 493 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 AP1ARQ63HQ0 302 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 KAZNQ674X7 775 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 HAUS6Q7Z4H7 955 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 MCOLN2Q8IZK6 566 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 CFAP57Q96MR6 1250 aa18.84■□□□□ 0.61
VHL-202ENST00000345392 C12orf65Q9H3J6 166 aaKnown RBP18.84■□□□□ 0.61
VHL-202ENST00000345392 ZNFX1Q9P2E3 1918 aaKnown RBP18.83■□□□□ 0.61
VHL-202ENST00000345392 NRXN2Q9P2S2 1712 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 GNAT1P11488 350 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 PLS3P13797 630 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 RASSF2P50749 326 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 MRPS35P82673 323 aaKnown RBP18.83■□□□□ 0.61
VHL-202ENST00000345392 SNRNP35Q16560 246 aaKnown RBP18.83■□□□□ 0.61
VHL-202ENST00000345392 DSTYKQ6XUX3 929 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 ZCCHC9Q8N567 271 aaKnown RBP18.83■□□□□ 0.61
VHL-202ENST00000345392 GMCL1P1Q8NEA9 526 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 KIFAP3Q92845 792 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 UPF1Q92900 1129 aaKnown RBP eCLIP18.83■□□□□ 0.617e-15■■■■■ 52.7
VHL-202ENST00000345392 PRMT6Q96LA8 375 aaPredicted RBP18.83■□□□□ 0.61
VHL-202ENST00000345392 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 DLGAP2Q9P1A6 1054 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 USP20Q9Y2K6 914 aa18.83■□□□□ 0.61
VHL-202ENST00000345392 IPO5O00410 1097 aaKnown RBP18.83■□□□□ 0.6
VHL-202ENST00000345392 PRPF4O43172 522 aaKnown RBP eCLIP18.83■□□□□ 0.6
VHL-202ENST00000345392 NEFHP12036 1026 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 KLRC2P26717 231 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 PTPN4P29074 926 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 ADSSP30520 456 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 STAT2P52630 851 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 CENPCQ03188 943 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 KLC1Q07866 573 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 CCNG2Q16589 344 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 WASHC2DQ5SRD0 308 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 KRT39Q6A163 491 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 LVRNQ6Q4G3 990 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 ZNF75CPQ92670 426 aaPredicted RBP18.83■□□□□ 0.6
VHL-202ENST00000345392 MAK16Q9BXY0 300 aaKnown RBP18.83■□□□□ 0.6
VHL-202ENST00000345392 OSBPL8Q9BZF1 889 aa18.83■□□□□ 0.6
VHL-202ENST00000345392 METTL5Q9NRN9 209 aaKnown RBP18.83■□□□□ 0.6
VHL-202ENST00000345392 ATRNL1Q5VV63 1379 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 BANF1O75531 89 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 FESP07332 822 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 MUTP22033 750 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 MARK3P27448 753 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 RFC5P40937 340 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 PEX3P56589 373 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 AOC3Q16853 763 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 TSNAXIP1Q2TAA8 658 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 SLC30A9Q6PML9 568 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 RIBC1Q8N443 379 aaPredicted RBP18.82■□□□□ 0.6
VHL-202ENST00000345392 BBOF1Q8ND07 529 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 TEKT4Q8WW24 435 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 TEKT3Q9BXF9 490 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 IDI2Q9BXS1 227 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 PAPOLBQ9NRJ5 636 aaKnown RBP18.82■□□□□ 0.6
VHL-202ENST00000345392 NMRK1Q9NWW6 199 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 PI4K2BG5E9Z4 385 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 MMP10P09238 476 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 KRT10P13645 584 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 MAPK6Q16659 721 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 ATP13A4Q4VNC1 1196 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 RNF220Q5VTB9 566 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 RELL1Q8IUW5 271 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 RBBP8NLQ8NC74 664 aaPredicted RBP18.82■□□□□ 0.6
VHL-202ENST00000345392 WDR11Q9BZH6 1224 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 TMX4Q9H1E5 349 aaPredicted RBP18.82■□□□□ 0.6
VHL-202ENST00000345392 DCLRE1BQ9H816 532 aa18.82■□□□□ 0.6
VHL-202ENST00000345392 SCAF8Q9UPN6 1271 aaKnown RBP18.82■□□□□ 0.6
VHL-202ENST00000345392 POLR2MP0CAP2 368 aa18.81■□□□□ 0.6
VHL-202ENST00000345392 UNGP13051 313 aaPredicted RBP18.81■□□□□ 0.6
VHL-202ENST00000345392 ACADSP16219 412 aa18.81■□□□□ 0.6
VHL-202ENST00000345392 PECAM1P16284 738 aaPredicted RBP18.81■□□□□ 0.6
VHL-202ENST00000345392 NOP14P78316 857 aaKnown RBP18.81■□□□□ 0.6
VHL-202ENST00000345392 CCDC6Q16204 474 aa18.81■□□□□ 0.6
VHL-202ENST00000345392 CLNKQ7Z7G1 428 aa18.81■□□□□ 0.6
VHL-202ENST00000345392 SPIRE2Q8WWL2 714 aa18.81■□□□□ 0.6
VHL-202ENST00000345392 KIFC3Q9BVG8 833 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms