RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ICA1LQ8NDH6 482 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 POLLQ9UGP5 575 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 LTN1O94822 1766 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 CBX6O95503 412 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 SPP2Q13103 211 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 PRPSAP1Q14558 356 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 CDO1Q16878 200 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 C7orf31Q8N865 590 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 COX16Q9P0S2 106 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 CHMP2BQ9UQN3 213 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 APOBEC2Q9Y235 224 aaKnown RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 NOD1Q9Y239 953 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 NEU2Q9Y3R4 380 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 M0QZ92 97 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 ATP9AO75110 1047 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 EEF1B2P24534 225 aaKnown RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 ECE1P42892 770 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 ZNF568Q3ZCX4 644 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 LMBRD2Q68DH5 695 aaPredicted RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 C11orf63Q6NUN7 778 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 NLRP9Q7RTR0 991 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 IQCKQ8N0W5 287 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 C4orf32Q8N8J7 132 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 DNAAF3Q8N9W5 541 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 JPH1Q9HDC5 661 aaPredicted RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 KCNH7Q9NS40 1196 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 PCSK1NQ9UHG2 260 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 PRKCIP41743 596 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 MAGEA4P43358 317 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 NFIAQ12857 509 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 EEPD1Q7L9B9 569 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 NUDCD3Q8IVD9 361 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 BAP1Q92560 729 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 NMD3Q96D46 503 aaKnown RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 A8MUI8 341 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 EFNA5P52803 228 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 IFRD2Q12894 506 aaPredicted RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 ART3Q13508 389 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 MREGQ8N565 214 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 TTC39CQ8N584 583 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 PPP1R36Q96LQ0 422 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 SNX25Q9H3E2 840 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 ACAD9Q9H845 621 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 C17orf75Q9HAS0 396 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 PSMC3IPQ9P2W1 217 aaPredicted RBP11.46□□□□□ -0.57
RPL28-201ENST00000344063 HEY2Q9UBP5 337 aa11.46□□□□□ -0.57
RPL28-201ENST00000344063 ASAP2O43150 1006 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 SHOX2O60902 331 aaPredicted RBP11.46□□□□□ -0.58
RPL28-201ENST00000344063 GPC4O75487 556 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 CA8P35219 290 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 FLT3P36888 993 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 CACNA2D1P54289 1103 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 TNFAIP2Q03169 654 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 DDR1Q08345 913 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.58
RPL28-201ENST00000344063 RAPH1Q70E73 1250 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 SULF1Q8IWU6 871 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 CD302Q8IX05 232 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 GLIS3Q8NEA6 775 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 OSBPL7Q9BZF2 842 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 UNC45AQ9H3U1 944 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 TLK1Q9UKI8 766 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 HLA-DRAP01903 254 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 APOEP02649 317 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 DRD4P21917 467 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 PSMC6P62333 389 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 ROR1Q01973 937 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 PIGHQ14442 188 aaPredicted RBP11.46□□□□□ -0.58
RPL28-201ENST00000344063 RPS6KA2Q15349 733 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 PPP6R3Q5H9R7 873 aaPredicted RBP11.46□□□□□ -0.58
RPL28-201ENST00000344063 LCA5Q86VQ0 697 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 RDM1Q8NG50 284 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 ATP8B4Q8TF62 1192 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 ACAP3Q96P50 834 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 WHRNQ9P202 907 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 CTNNAL1Q9UBT7 734 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 C2CD2Q9Y426 696 aa11.46□□□□□ -0.58
RPL28-201ENST00000344063 ZBBXA8MT70 800 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 DDX3XO00571 662 aaKnown RBP eCLIP11.45□□□□□ -0.581e-24■■■□□ 17
RPL28-201ENST00000344063 SRGAP2BP0DMP2 458 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 AADACL2Q6P093 401 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
RPL28-201ENST00000344063 GMCL1P1Q8NEA9 526 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms