RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CLEC16AQ2KHT3 1053 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 WDR72Q3MJ13 1102 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 EFHC2Q5JST6 749 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 ODR4Q5SWX8 454 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 LVRNQ6Q4G3 990 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 C4orf33Q8N1A6 199 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PLEKHO2Q8TD55 490 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 DYDC2Q96IM9 177 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 SAYSD1Q9NPB0 183 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PSMC3IPQ9P2W1 217 aaPredicted RBP10.23□□□□□ -0.77
HOXA1-201ENST00000343060 NARFQ9UHQ1 456 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 F8W8V4 182 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PSMD10O75832 226 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MAPTP10636 758 aaKnown RBP10.23□□□□□ -0.77
HOXA1-201ENST00000343060 GCLMP48507 274 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MXI1P50539 228 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MFAP3P55082 362 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 ALCAMQ13740 583 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 NFIXQ14938 502 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 DAW1Q8N136 415 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 RFWD2Q8NHY2 731 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 WDR60Q8WVS4 1066 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MKL1Q969V6 931 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 HAPLN3Q96S86 360 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 MAK16Q9BXY0 300 aaKnown RBP10.23□□□□□ -0.77
HOXA1-201ENST00000343060 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 TMEM117Q9H0C3 514 aa10.23□□□□□ -0.77
HOXA1-201ENST00000343060 LARSQ9P2J5 1176 aaKnown RBP10.23□□□□□ -0.77
HOXA1-201ENST00000343060 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 ALOX15BO15296 676 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 TGDSO95455 350 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 RARBP10826 455 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 RALAP11233 206 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 KRT15P19012 456 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 SERPINB4P48594 390 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 CDK16Q00536 496 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 LLGL1Q15334 1064 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 P3H1Q32P28 736 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 PABPC1LQ4VXU2 614 aaKnown RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 DRICH1Q6PGQ1 229 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 TPTE2Q6XPS3 522 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 CCNJLQ8IV13 435 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 KATNAL2Q8IYT4 538 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 HELQQ8TDG4 1101 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 GBP5Q96PP8 586 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 DHRS4Q9BTZ2 278 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 VPS11Q9H270 941 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 ACP6Q9NPH0 428 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 DDX4Q9NQI0 724 aaKnown RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 IL1RAPL1Q9NZN1 696 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 ANGPTL2Q9UKU9 493 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 COQ4Q9Y3A0 265 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 TM9SF1O15321 606 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 GYG2O15488 501 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 MAGEC1O60732 1142 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 LYNP07948 512 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 PIM1P11309 404 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 UNGP13051 313 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 PLS3P13797 630 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 GSTT1P30711 240 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 MFSD14BQ5SR56 506 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 SYCP3Q8IZU3 236 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 SMC1BQ8NDV3 1235 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 MZB1Q8WU39 189 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 STMN2Q93045 179 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 GPR101Q96P66 508 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 NACC1Q96RE7 527 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 ASCC2Q9H1I8 757 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 TMEM206Q9H813 350 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 ARHGEF4Q9NR80 690 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 TAS2R1Q9NYW7 299 aa10.22□□□□□ -0.77
HOXA1-201ENST00000343060 MTO1Q9Y2Z2 717 aaKnown RBP10.22□□□□□ -0.77
HOXA1-201ENST00000343060 SIPA1L1O43166 1804 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 A0A1W2PPM1 405 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 PROSCO94903 275 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 CETN2P41208 172 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 PRELPP51888 382 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 FASTKD3Q14CZ7 662 aaKnown RBP10.21□□□□□ -0.77
HOXA1-201ENST00000343060 MORF4L2Q15014 288 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 DLGAP5Q15398 846 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 CNPY1Q3B7I2 92 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 RINLQ6ZS11 566 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 CHSY1Q86X52 802 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 TPH2Q8IWU9 490 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 MCOLN2Q8IZK6 566 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 MARCH10Q8NA82 808 aaPredicted RBP10.21□□□□□ -0.77
HOXA1-201ENST00000343060 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 CYP2W1Q8TAV3 490 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 TRIM11Q96F44 468 aa10.21□□□□□ -0.77
HOXA1-201ENST00000343060 WDR18Q9BV38 432 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms