RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 RNF169Q8NCN4 708 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 EHBP1Q8NDI1 1231 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 OR5B17Q8NGF7 314 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 SEMA4DQ92854 862 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 DNAJC7Q99615 494 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 C17orf80Q9BSJ5 609 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 C11orf84Q9BUA3 381 aaPredicted RBP9.37□□□□□ -0.91
NLRC4-201ENST00000342905 PLVAPQ9BX97 442 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 EDEM3Q9BZQ6 932 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 COQ4Q9Y3A0 265 aa9.37□□□□□ -0.91
NLRC4-201ENST00000342905 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
NLRC4-201ENST00000342905 LRRC53A6NM62 1247 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 LACTBL1A8MY62 500 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 H3BNC9 293 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 LPXNO60711 386 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 VNN1O95497 513 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 HLA-DRAP01903 254 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 LINC00271P0C7V0 271 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 SKILP12757 684 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 UCHL3P15374 230 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 BMPR1AP36894 532 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 GATMP50440 423 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 POU5F1Q01860 360 aaKnown RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 CETN1Q12798 172 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 PTPROQ16827 1216 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 SLC10A6Q3KNW5 377 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 WDR59Q6PJI9 974 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 RRAGAQ7L523 313 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 ZSCAN30Q86W11 494 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 CCDC112Q8NEF3 446 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 OR8K1Q8NGG5 319 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 TAS1R2Q8TE23 839 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 GDPD5Q8WTR4 605 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 PGBD4Q96DM1 585 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 ACAP3Q96P50 834 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 BAG1Q99933 345 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 CCDC94Q9BW85 323 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 NAA15Q9BXJ9 866 aaKnown RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 MRPL9Q9BYD2 267 aaKnown RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 NXF3Q9H4D5 531 aaKnown RBP9.36□□□□□ -0.91
NLRC4-201ENST00000342905 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 RNF19AQ9NV58 838 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 SNTG2Q9NY99 539 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 APEX2Q9UBZ4 518 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
NLRC4-201ENST00000342905 COL4A4P53420 1690 aaPredicted RBP9.35□□□□□ -0.91
NLRC4-201ENST00000342905 PATJQ8NI35 1801 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 RFXAPO00287 272 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 NRDCO43847 1150 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 NFICP08651 508 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 LAG3P18627 525 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 PIK3CAP42336 1068 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 AP3M2P53677 418 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 JAM2P57087 298 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 BIRC3Q13489 604 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 CLLU1OSQ5K130 101 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 SCARA3Q6AZY7 606 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 JADE1Q6IE81 842 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 PHLDB3Q6NSJ2 640 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 MRPL10Q7Z7H8 261 aaKnown RBP9.35□□□□□ -0.91
NLRC4-201ENST00000342905 GPIHBP1Q8IV16 184 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 HACE1Q8IYU2 909 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 SMG8Q8ND04 991 aaKnown RBP9.35□□□□□ -0.91
NLRC4-201ENST00000342905 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 SNX27Q96L92 541 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 CASD1Q96PB1 797 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 CHP1Q99653 195 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 PI4K2AQ9BTU6 479 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 APOL6Q9BWW8 343 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 MTMR12Q9C0I1 747 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 ASB7Q9H672 318 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.91
NLRC4-201ENST00000342905 RAB20Q9NX57 234 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 HES2Q9Y543 173 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 PCDHB12Q9Y5F1 795 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 MTCH2Q9Y6C9 303 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 A0A0C4DFX4 3053 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
NLRC4-201ENST00000342905 MYO16Q9Y6X6 1858 aa9.34□□□□□ -0.91
NLRC4-201ENST00000342905 CARNS1A5YM72 827 aa9.34□□□□□ -0.91
NLRC4-201ENST00000342905 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
NLRC4-201ENST00000342905 PHACTR2O75167 634 aa9.34□□□□□ -0.91
NLRC4-201ENST00000342905 RECQL4O94761 1208 aa9.34□□□□□ -0.91
NLRC4-201ENST00000342905 TNNC2P02585 160 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms