RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 NUMBLQ9Y6R0 609 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CLRN2A0PK11 232 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 PPP1R12AO14974 1030 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 PHACTR2O75167 634 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 PFKMP08237 780 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 FGFR1P11362 822 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CYP2J2P51589 502 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CUL2Q13617 745 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 XKR3Q5GH77 459 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ZBTB41Q5SVQ8 909 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ATG4CQ96DT6 458 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 UBN1Q9NPG3 1134 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 TMOD4Q9NZQ9 345 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 EXOC7Q9UPT5 735 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 NME7Q9Y5B8 376 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 DPYSL4O14531 572 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 USP2O75604 605 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CCT5P48643 541 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 RBM5P52756 815 aaKnown RBP eCLIP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 IRF5Q13568 498 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 XKR4Q5GH76 650 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CCDC181Q5TID7 509 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 TRNP1Q6NT89 227 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 RNF207Q6ZRF8 634 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 MMS22LQ6ZRQ5 1243 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 MCRS1Q96EZ8 462 aa8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ACO2Q99798 780 aaKnown RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 CDC42EP4Q9H3Q1 356 aaKnown RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 ACTR5Q9H9F9 607 aaPredicted RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 RAVER2Q9HCJ3 691 aaKnown RBP8.64□□□□□ -1.03
CFAP54-201ENST00000342887 hCG_1818297A0A087WSY0 165 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ADCY3O60266 1144 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 OATP04181 439 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 MYZAPP0CAP1 466 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 EIF4BP23588 611 aaKnown RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SEC24CP53992 1094 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 IFI35P80217 286 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 PRKCEQ02156 737 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 BNIP1Q12981 228 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 MTMR2Q13614 643 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SLC29A2Q14542 456 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ALKAL1Q6UXT8 129 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 NAT8LQ8N9F0 302 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ZNF280CQ8ND82 737 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 EBF2Q9HAK2 575 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ARHGEF3Q9NR81 526 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 NINJ2Q9NZG7 142 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 KANSL3Q9P2N6 904 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 UTP11Q9Y3A2 253 aaKnown RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SCN8AQ9UQD0 1980 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 DENND3A2RUS2 1198 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SNX3O60493 162 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 EXOC3O60645 756 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 GABBR2O75899 941 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 PAX7P23759 505 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 GUCY2FP51841 1108 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 RWDD2BP57060 319 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 UBXN2AP68543 259 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 EFHC2Q5JST6 749 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 CCDC13Q8IYE1 715 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 CMASQ8NFW8 434 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 OR6Y1Q8NGX8 325 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 POMGNT1Q8WZA1 660 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 ATP6V0A4Q9HBG4 840 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SLC9A2Q9UBY0 812 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 CLUHO75153 1309 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 SCN10AQ9Y5Y9 1956 aa8.63□□□□□ -1.03
CFAP54-201ENST00000342887 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
CFAP54-201ENST00000342887 IQCF3P0C7M6 154 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 TGFB3P10600 412 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 TNFAIP3P21580 790 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 HNRNPH1P31943 449 aaKnown RBP8.62□□□□□ -1.03
CFAP54-201ENST00000342887 GCKP35557 465 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 COPB2P35606 906 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 ETV4P43268 484 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 PEX3P56589 373 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 CDK18Q07002 472 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
CFAP54-201ENST00000342887 EMC2Q15006 297 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 ZBTB6Q15916 424 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 ILDR2Q71H61 639 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 KLHL7Q8IXQ5 586 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
CFAP54-201ENST00000342887 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
CFAP54-201ENST00000342887 RMDN3Q96TC7 470 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms