RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SUPT3HO75486 399 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 PEX19P40855 299 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 TGS1Q96RS0 853 aaKnown RBP15.74■□□□□ 0.11
UBE3B-202ENST00000342494 KLK14Q9P0G3 267 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 UCHL3P15374 230 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 ETFBP38117 255 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
UBE3B-202ENST00000342494 SLC25A41Q8N5S1 370 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 OR9Q1Q8NGQ5 310 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 ELMO2Q96JJ3 720 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 CDV3Q9UKY7 258 aaKnown RBP15.74■□□□□ 0.11
UBE3B-202ENST00000342494 PCDHB2Q9Y5E7 798 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 SNX5Q9Y5X3 404 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 C5orf58C9J3I9 102 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 H7C4K7 107 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 ATP5HO75947 161 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 RPA1P27694 616 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
UBE3B-202ENST00000342494 PDK1Q15118 436 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 HS6ST3Q8IZP7 471 aa15.74■□□□□ 0.11
UBE3B-202ENST00000342494 H0Y626 953 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 HOXA2O43364 376 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 PPP3CCP48454 512 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 KRT72Q14CN4 511 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 BEND6Q5SZJ8 279 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 GPAT2Q6NUI2 795 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 SLC35G2Q8TBE7 412 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ARHGEF26Q96DR7 871 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 DACH2Q96NX9 599 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 FBXO28Q9NVF7 368 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF609O15014 1411 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 MCF2P10911 925 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ADSSL1Q8N142 457 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 PCSK9Q8NBP7 692 aaKnown RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 EPB41L4AQ9HCS5 686 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 NDE1Q9NXR1 346 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF263O14978 683 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 KDM1AO60341 852 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 RGS4P49798 205 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 USP10Q14694 798 aaKnown RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 MTFR1Q15390 333 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 TRADDQ15628 312 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 EDRF1Q3B7T1 1238 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 BHMTQ93088 406 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 YME1L1Q96TA2 773 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 SPATA16Q9BXB7 569 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 MROH8Q9H579 483 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 AMACRQ9UHK6 382 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 LAMC1P11047 1609 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 B3GAT3O94766 335 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ITGB3P05106 788 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 GALCP54803 685 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 SLC18A3Q16572 532 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 GPD1P21695 349 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 PPP2R2AP63151 447 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 OTULINQ96BN8 352 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 CYP4F11Q9HBI6 524 aa15.73■□□□□ 0.11
UBE3B-202ENST00000342494 ZC3H7BQ9UGR2 993 aaKnown RBP15.73■□□□□ 0.11
UBE3B-202ENST00000342494 YY1P25490 414 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 SYDE1Q6ZW31 735 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-202ENST00000342494 OOSP2Q86WS3 158 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 ABHD8Q96I13 439 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 PRMT6Q96LA8 375 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-202ENST00000342494 SLC11A2P49281 568 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 STAT4Q14765 748 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 IPMKQ8NFU5 416 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 UCMAQ8WVF2 138 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 CCDC90BQ9GZT6 254 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 GTF2H1P32780 548 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 GLRA4Q5JXX5 417 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 RGS9BPQ6ZS82 235 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 ATP6V0D2Q8N8Y2 350 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 H0Y3Z8 333 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 GGCXP38435 758 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 TGFB2P61812 414 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 LRRC14Q15048 493 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 LRRC8EQ6NSJ5 796 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-202ENST00000342494 KCTD17Q8N5Z5 321 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 MRPS31Q92665 395 aaKnown RBP15.72■□□□□ 0.11
UBE3B-202ENST00000342494 DPP3Q9NY33 737 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
UBE3B-202ENST00000342494 GTPBP10A4D1E9 387 aaKnown RBP15.71■□□□□ 0.11
UBE3B-202ENST00000342494 STK4Q13043 487 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 ZNF484Q5JVG2 852 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 TRAPPC11Q7Z392 1133 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 TRIM48Q8IWZ4 208 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 SNX31Q8N9S9 440 aa15.71■□□□□ 0.11
UBE3B-202ENST00000342494 SHCBP1Q8NEM2 672 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms