RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 VNN2O95498 520 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 HOXB3P14651 431 aaPredicted RBP18.51■□□□□ 0.55
TRA2B-202ENST00000342294 KCNE1P15382 129 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
TRA2B-202ENST00000342294 PON2Q15165 354 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 ZNF280DQ6N043 979 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 ARID3BQ8IVW6 561 aaPredicted RBP18.51■□□□□ 0.55
TRA2B-202ENST00000342294 MKNK1Q9BUB5 465 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 POLR3CQ9BUI4 534 aaPredicted RBP18.51■□□□□ 0.55
TRA2B-202ENST00000342294 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 CDT1Q9H211 546 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 SLITRK6Q9H5Y7 841 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 PTPRHQ9HD43 1115 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 TOPORSQ9NS56 1045 aaPredicted RBP18.51■□□□□ 0.55
TRA2B-202ENST00000342294 GTSE1Q9NYZ3 720 aa18.51■□□□□ 0.55
TRA2B-202ENST00000342294 A0A1W2PRU2 124 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 C1QTNF9BB2RNN3 333 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 MEFVO15553 781 aaPredicted RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 RPP40O75818 363 aaKnown RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 C1QTNF9P0C862 333 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 KRT2P35908 639 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 YARSP54577 528 aaKnown RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 APBB1IPQ7Z5R6 666 aaPredicted RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 KDF1Q8NAX2 398 aaPredicted RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 DDX12PQ92771 950 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 ZC3H10Q96K80 434 aaKnown RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
TRA2B-202ENST00000342294 DNAJC25Q9H1X3 360 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 TMEM60Q9H2L4 133 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 ZMIZ1Q9ULJ6 1067 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 YIPF1Q9Y548 306 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 NUB1Q9Y5A7 615 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 PCDHGA5Q9Y5G8 931 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 TRIP11Q15643 1979 aa18.5■□□□□ 0.55
TRA2B-202ENST00000342294 ZFYVE26Q68DK2 2539 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 REC8O95072 547 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 ARHGAP29Q52LW3 1261 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 STXBP5Q5T5C0 1151 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 PKN3Q6P5Z2 889 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 UNQ6494/PRO21346Q6UXR6 183 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 APPL2Q8NEU8 664 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 TTC8Q8TAM2 541 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 C18orf25Q96B23 403 aaPredicted RBP18.49■□□□□ 0.55
TRA2B-202ENST00000342294 ZFYVE19Q96K21 471 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 ACO2Q99798 780 aaKnown RBP18.49■□□□□ 0.55
TRA2B-202ENST00000342294 SMOC1Q9H4F8 434 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 CNTN3Q9P232 1028 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 WASF3Q9UPY6 502 aa18.49■□□□□ 0.55
TRA2B-202ENST00000342294 ARHGEF35A5YM69 484 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 K7ERI5 159 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 AKAP3O75969 853 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 FDPSP14324 419 aaKnown RBP18.48■□□□□ 0.55
TRA2B-202ENST00000342294 CPB1P15086 417 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 PXNP49023 591 aaPredicted RBP18.48■□□□□ 0.55
TRA2B-202ENST00000342294 OSTNP61366 133 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 FAM200AQ8TCP9 573 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 IFT74Q96LB3 600 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 TMEM121BQ9BXQ6 578 aaPredicted RBP18.48■□□□□ 0.55
TRA2B-202ENST00000342294 CRISPLD1Q9H336 500 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 OBP2AQ9NY56 170 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 ORC3Q9UBD5 711 aaPredicted RBP18.48■□□□□ 0.55
TRA2B-202ENST00000342294 PCDHB8Q9UN66 801 aa18.48■□□□□ 0.55
TRA2B-202ENST00000342294 ZZEF1O43149 2961 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 ABLIM1O14639 778 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
TRA2B-202ENST00000342294 PFKFB2O60825 505 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 OAZ2O95190 189 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 RPA1P27694 616 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 MPLP40238 635 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 CACNB1Q02641 598 aaPredicted RBP18.47■□□□□ 0.55
TRA2B-202ENST00000342294 PSAPL1Q6NUJ1 521 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 GAREM2Q75VX8 874 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 KIFAP3Q92845 792 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 VPS45Q9NRW7 570 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
TRA2B-202ENST00000342294 PDCD11Q14690 1871 aaKnown RBP18.46■□□□□ 0.55
TRA2B-202ENST00000342294 BTBD18B2RXH4 712 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 PROZP22891 400 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 WEE1P30291 646 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 MCM4P33991 863 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 TNK2Q07912 1038 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 ZNF568Q3ZCX4 644 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 RNF43Q68DV7 783 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 TAS1R3Q7RTX0 852 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 HAUS6Q7Z4H7 955 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 WASF1Q92558 559 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 ACAP3Q96P50 834 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 BRMS1Q9HCU9 246 aa18.46■□□□□ 0.55
TRA2B-202ENST00000342294 SPAG17Q6Q759 2223 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 M0QZQ0 153 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 OR4Q2P0C623 313 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 CCDC192P0DO97 292 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 MCF2P10911 925 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 EPHB3P54753 998 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
TRA2B-202ENST00000342294 DUSP4Q13115 394 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms