RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 KCNE1P15382 129 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 KLRC1P26715 233 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 TMOD1P28289 359 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PHKA2P46019 1235 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 EPHA4P54764 986 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PSMC6P62333 389 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MORC3Q14149 939 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 STK38Q15208 465 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 NAB2Q15742 525 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 TCTN1Q2MV58 587 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 EDRF1Q3B7T1 1238 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 WDR44Q5JSH3 913 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ZNF720Q7Z2F6 126 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 C11orf96Q7Z7L8 435 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 FAM228AQ86W67 206 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 CD302Q8IX05 232 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PSPC1Q8WXF1 523 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 NKD2Q969F2 451 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 TMEM175Q9BSA9 504 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 FUCA2Q9BTY2 467 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 PHF7Q9BWX1 381 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 FTOQ9C0B1 505 aaKnown RBP eCLIP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 EPC1Q9H2F5 836 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 KCTD10Q9H3F6 313 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ISY1Q9ULR0 285 aaKnown RBP3.83□□□□□ -1.8
CCDC66-202ENST00000341455 MAFFQ9ULX9 164 aa3.83□□□□□ -1.8
CCDC66-202ENST00000341455 ADGRA3Q8IWK6 1321 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 UPK3BL1B0FP48 263 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 UPK3BL2E5RIL1 263 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SLC16A3O15427 465 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 HOXB8P17481 243 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GPC1P35052 558 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 HOXD13P35453 343 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 AARSP49588 968 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 LBRQ14739 615 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 ZBTB6Q15916 424 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 ZNF618Q5T7W0 954 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SV2BQ7L1I2 683 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 RTL10Q7L3V2 364 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 DGLUCYQ7Z3D6 616 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CCDC116Q8IYX3 515 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GUF1Q8N442 669 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CXorf38Q8TB03 319 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GOLGA5Q8TBA6 731 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SLC7A3Q8WY07 619 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 BSNDQ8WZ55 320 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 EPSTI1Q96J88 318 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GBP4Q96PP9 640 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 DNAJC7Q99615 494 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 REEP2Q9BRK0 252 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.82□□□□□ -1.82e-6■■■■■ 149.1
CCDC66-202ENST00000341455 RMND1Q9NWS8 449 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CNTN3Q9P232 1028 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 DKK4Q9UBT3 224 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GREB1Q4ZG55 1949 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CITO14578 2027 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 OBSL1O75147 1896 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 A0A0U1RQF3 1178 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CAPN8A6NHC0 703 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SLC30A4O14863 429 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 HIP1RO75146 1068 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CYP2C9P11712 490 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 PTGS1P23219 599 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SFPQP23246 707 aaKnown RBP eCLIP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 UBA7P41226 1012 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SCTRP47872 440 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 NPTX2P47972 431 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 DNM2P50570 870 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 NDUFA8P51970 172 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 TBC1D8BQ0IIM8 1120 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CTTNQ14247 550 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 C6orf118Q5T5N4 469 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 RRAGBQ5VZM2 374 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 CENPPQ6IPU0 288 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 EFCAB12Q6NXP0 572 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 ZC3H14Q6PJT7 736 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 USP49Q70CQ1 688 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 EEPD1Q7L9B9 569 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 NETO1Q8TDF5 533 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 HDAC7Q8WUI4 952 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 UROC1Q96N76 676 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 ACO2Q99798 780 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SPON2Q9BUD6 331 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 OXCT2Q9BYC2 517 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GCOM2Q9BZD3 368 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 TRPV6Q9H1D0 765 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 POLR3FQ9H1D9 316 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 HIPK3Q9H422 1215 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 PDZD7Q9H5P4 517 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 TMEM206Q9H813 350 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 PARVGQ9HBI0 331 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 TRMT13Q9NUP7 481 aaKnown RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SETD4Q9NVD3 440 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 TMEM161AQ9NX61 479 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 SUCLA2Q9P2R7 463 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-202ENST00000341455 EFR3BQ9Y2G0 817 aa3.82□□□□□ -1.8
CCDC66-202ENST00000341455 GIT1Q9Y2X7 761 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms