RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 NAA30Q147X3 362 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-201ENST00000340748 PRAMEF19Q5SWL8 479 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 RAD9BQ6WBX8 426 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 TRMT10CQ7L0Y3 403 aaKnown RBP13.53□□□□□ -0.24
DNMT1-201ENST00000340748 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
DNMT1-201ENST00000340748 GMCL1P1Q8NEA9 526 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 DHX35Q9H5Z1 703 aaKnown RBP13.53□□□□□ -0.24
DNMT1-201ENST00000340748 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
DNMT1-201ENST00000340748 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 TROAPQ12815 778 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 EMC2Q15006 297 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 C18orf8Q96DM3 657 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
DNMT1-201ENST00000340748 NFKBIEO00221 500 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 ITIH2P19823 946 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 CCL23P55773 120 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 RBP5P82980 135 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 AP1B1Q10567 949 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.24
DNMT1-201ENST00000340748 NOTUMQ6P988 496 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 ZNF677Q86XU0 584 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 ANKEF1Q9NU02 776 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 BTBD19C9JJ37 291 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 MYO1CO00159 1063 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 CLGNO14967 610 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 SMIM24O75264 130 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 RALAP11233 206 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.249e-7■■□□□ 11.9
DNMT1-201ENST00000340748 ACCSLQ4AC99 568 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 CYP4A22Q5TCH4 519 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 LRRC37BQ96QE4 947 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 PPCSQ9HAB8 311 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 SLC28A3Q9HAS3 691 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.24
DNMT1-201ENST00000340748 LSM7Q9UK45 103 aaKnown RBP13.52□□□□□ -0.24
DNMT1-201ENST00000340748 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
DNMT1-201ENST00000340748 AP3B1O00203 1094 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 ZNF185O15231 689 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 IL18RAPO95256 599 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 DNAJB2P25686 324 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 SOX10P56693 466 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 IL1RL1Q01638 556 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 MFSD10Q14728 455 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 PTPAQ15257 358 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 CCDC124Q96CT7 223 aaKnown RBP13.52□□□□□ -0.25
DNMT1-201ENST00000340748 INTUQ9ULD6 942 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 FAF1Q9UNN5 650 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-201ENST00000340748 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 ARFIP2P53365 341 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 PIGHQ14442 188 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-201ENST00000340748 HIF1AQ16665 826 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 KIF19Q2TAC6 998 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 FRA10AC1Q70Z53 315 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 ZFPM1Q8IX07 1006 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 DNERQ8NFT8 737 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 SYNDIG1Q9H7V2 258 aa13.52□□□□□ -0.25
DNMT1-201ENST00000340748 STMN1P16949 149 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 ADCYAP1R1P41586 468 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 EIF3EP60228 445 aaKnown RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 FOXP3Q9BZS1 431 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 ZMYND8Q9ULU4 1186 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 CFAP73A6NFT4 308 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 RSPH10B2B2RC85 870 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 SNX2O60749 519 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 RSPH10BP0C881 870 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 NCOA4Q13772 614 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 IQSEC1Q6DN90 963 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 CCNI2Q6ZMN8 369 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 KCNH7Q9NS40 1196 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 PYGBP11216 843 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 MUTP22033 750 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 ACTR2P61160 394 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 LMBRD2Q68DH5 695 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 KRT80Q6KB66 452 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 DYRK4Q9NR20 520 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 PCDHAC2Q9Y5I4 1007 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 CDK17Q00537 523 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 KLHDC7AQ5VTJ3 777 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 EXT2Q93063 718 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 KLRG1Q96E93 195 aa13.51□□□□□ -0.25
DNMT1-201ENST00000340748 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
DNMT1-201ENST00000340748 NPTXRO95502 500 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 NME3Q13232 169 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 TMTC4Q5T4D3 741 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 NUDCD3Q8IVD9 361 aa13.5□□□□□ -0.25
DNMT1-201ENST00000340748 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms