RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 AARSP49588 968 aaKnown RBP eCLIP20.72■□□□□ 0.91
SYNE4-202ENST00000340477 LILRA4P59901 499 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 YWHAHQ04917 246 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-202ENST00000340477 CBX2Q14781 532 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-202ENST00000340477 DUOXA2Q1HG44 320 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 ATAT1Q5SQI0 421 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 KREMEN2Q8NCW0 462 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 MTMR12Q9C0I1 747 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 S1PR5Q9H228 398 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 KCTD10Q9H3F6 313 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 DSEQ9UL01 958 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 FRMD4BQ9Y2L6 1034 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 PPEF2O14830 753 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 ITGB3P05106 788 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 DLATP10515 647 aaKnown RBP20.71■□□□□ 0.91
SYNE4-202ENST00000340477 TYMPP19971 482 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 RPL13P26373 211 aaKnown RBP20.71■□□□□ 0.91
SYNE4-202ENST00000340477 POLR2BP30876 1174 aaKnown RBP20.71■□□□□ 0.91
SYNE4-202ENST00000340477 RBP5P82980 135 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 CYP24A1Q07973 514 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 STIM1Q13586 685 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 RAB33AQ14088 237 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 MYBPC2Q14324 1141 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 PSMD6Q15008 389 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 TMC5Q6UXY8 1006 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 METTL23Q86XA0 190 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 SLC9A9Q8IVB4 645 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 ADHFE1Q8IWW8 467 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 C12orf76Q8N812 135 aaPredicted RBP20.71■□□□□ 0.91
SYNE4-202ENST00000340477 SUSD6Q92537 303 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 CCDC127Q96BQ5 260 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 SENP8Q96LD8 212 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 FBXW11Q9UKB1 542 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 AGAP1Q9UPQ3 857 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
SYNE4-202ENST00000340477 SCN1AP35498 2009 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 TSC2P49815 1807 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 SPATA31D3P0C874 917 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CPB1P15086 417 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 ARPP19P56211 112 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 WNT7BP56706 349 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 MYO1EQ12965 1108 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 ZNF658Q5TYW1 1059 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-202ENST00000340477 OVOS1Q6IE37 1185 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 SLC8B1Q6J4K2 584 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CYP26C1Q6V0L0 522 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 C15orf39Q6ZRI6 1047 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 SPATA31D4Q6ZUB0 917 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CCDC149Q6ZUS6 474 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 TMEM130Q8N3G9 435 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 LRRC52Q8N7C0 313 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 C1orf127Q8N9H9 656 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CMASQ8NFW8 434 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-202ENST00000340477 NECAB3Q96P71 396 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-202ENST00000340477 GBP4Q96PP9 640 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 CGRRF1Q99675 332 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 PHF7Q9BWX1 381 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-202ENST00000340477 PIDD1Q9HB75 910 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 ZDHHC7Q9NXF8 308 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 PCDHA5Q9Y5H7 936 aa20.7■□□□□ 0.9
SYNE4-202ENST00000340477 A0A0C4DFX4 3053 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 ELF1P32519 619 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 BFSP1Q12934 665 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 PPM1LQ5SGD2 360 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 CEP135Q66GS9 1140 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 LMBRD2Q68DH5 695 aaPredicted RBP20.69■□□□□ 0.9
SYNE4-202ENST00000340477 LILRA6Q6PI73 481 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 TMEM174Q8WUU8 243 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 TSG101Q99816 390 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 FBXL5Q9UKA1 691 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 TRAF3IP3Q9Y228 551 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 NR2E1Q9Y466 385 aa20.69■□□□□ 0.9
SYNE4-202ENST00000340477 NCOR1O75376 2440 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 TTC28Q96AY4 2481 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 CUL9Q8IWT3 2517 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 CCDC195A0A1B0GUA6 201 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 OR6C75A6NL08 312 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 KPNA7A9QM74 516 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 TNFRSF10AO00220 468 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 CYB561D2O14569 222 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 ADAM12O43184 909 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 CLSTN1O94985 981 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 OAZ2O95190 189 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 C8AP07357 584 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 NR2F2P24468 414 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 PPP1R2P41236 205 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 AP3M2P53677 418 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 ROR1Q01973 937 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 ZP2Q05996 745 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 MRPL58Q14197 206 aaKnown RBP20.68■□□□□ 0.9
SYNE4-202ENST00000340477 RTL10Q7L3V2 364 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 GPR149Q86SP6 731 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 SMYD4Q8IYR2 804 aaPredicted RBP20.68■□□□□ 0.9
SYNE4-202ENST00000340477 GJD3Q8N144 294 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 MFSD14AQ96MC6 490 aa20.68■□□□□ 0.9
SYNE4-202ENST00000340477 TIMM13Q9Y5L4 95 aaPredicted RBP20.68■□□□□ 0.9
SYNE4-202ENST00000340477 GOLGA6L22H0YM25 854 aa20.67■□□□□ 0.9
SYNE4-202ENST00000340477 PRRG1O14668 218 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms