RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SPOPLQ6IQ16 392 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 KCNT2Q6UVM3 1135 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 COLGALT1Q8NBJ5 622 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 NEK11Q8NG66 645 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 RABGGTAQ92696 567 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 IQCDQ96DY2 449 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 FAM81BQ96LP2 452 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 GANQ9H2C0 597 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 MARCH5Q9NX47 278 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 FBXL5Q9UKA1 691 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 PRG3Q9Y2Y8 225 aaPredicted RBP19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 NUB1Q9Y5A7 615 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 LCHNA4D1U4 455 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 GRXCR1A8MXD5 290 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 NOL4O94818 638 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 P4HA1P13674 534 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 IGFBP6P24592 240 aaPredicted RBP19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 GCNT1Q02742 428 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 LRMPQ12912 555 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 PTPN21Q16825 1174 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 WDR72Q3MJ13 1102 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 FIGNQ5HY92 759 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 SPECC1LQ69YQ0 1117 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 SMYD5Q6GMV2 418 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 PHLDB3Q6NSJ2 640 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 ARHGEF19Q8IW93 802 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 SLC39A11Q8N1S5 342 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 TATDN2Q93075 761 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 NUP58Q9BVL2 599 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 FAM207AQ9NSI2 230 aaPredicted RBP19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 KIAA1671Q9BY89 1806 aa19.19■□□□□ 0.66
SDCBP2-201ENST00000339987 ITGB1P05556 798 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 TBXAS1P24557 533 aaPredicted RBP19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 TNNC1P63316 161 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 APBA1Q02410 837 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 ENOSF1Q7L5Y1 443 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 LIMS2Q7Z4I7 341 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 SUSD3Q96L08 255 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.663e-10■■■■■ 153.8
SDCBP2-201ENST00000339987 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 ADAM28Q9UKQ2 775 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 RWDD3Q9Y3V2 267 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 SNX9Q9Y5X1 595 aa19.18■□□□□ 0.66
SDCBP2-201ENST00000339987 ARHGEF37A1IGU5 675 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 LINC01553A4QN01 128 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 F8W810 466 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 M0QZQ0 153 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 EPHB6O15197 1021 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TRAPPC3O43617 180 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TADA2AO75478 443 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 CLSTN1O94985 981 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 FAM163BP0C2L3 166 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 UCHL3P15374 230 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 PPM1AP35813 382 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 PBX3P40426 434 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 ASPAP45381 313 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 ELAVL2Q12926 359 aaKnown RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 CUL2Q13617 745 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 RAB30Q15771 203 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TIGD5Q53EQ6 642 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 DPH6Q7L8W6 267 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 PPM1KQ8N3J5 372 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 JAKMIP2Q96AA8 810 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 ELMO3Q96BJ8 720 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 IGSF21Q96ID5 467 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 SENP8Q96LD8 212 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 NAA15Q9BXJ9 866 aaKnown RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TTYH3Q9C0H2 523 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 FAM124BQ9H5Z6 455 aaPredicted RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 CYP3A43Q9HB55 503 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 SPG21Q9NZD8 308 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 POLIQ9UNA4 740 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 PCDHB12Q9Y5F1 795 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 GBF1Q92538 1859 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 NT5C1B-RDH14C9J2C7 533 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 SF3B1O75533 1304 aaKnown RBP eCLIP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 EFEMP2O95967 443 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TRIM21P19474 475 aaKnown RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 MFAP3P55082 362 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TRIM14Q14142 442 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 PRPF38BQ5VTL8 546 aaKnown RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 IQCEQ6IPM2 695 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 DSTYKQ6XUX3 929 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 RRAGAQ7L523 313 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TMEM173Q86WV6 379 aaPredicted RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 HASPINQ8TF76 798 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 BCL7CQ8WUZ0 217 aaPredicted RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 KREMEN1Q96MU8 473 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 UBE2TQ9NPD8 197 aaPredicted RBP19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 CEP72Q9P209 647 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 DNAJC12Q9UKB3 198 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 FHOD1Q9Y613 1164 aa19.17■□□□□ 0.66
SDCBP2-201ENST00000339987 A0A1W2PPC1 479 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms