RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 GOLGA2P5Q9HBQ8 144 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 STARD7Q9NQZ5 370 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 CISHQ9NSE2 258 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 WBP1LQ9NX94 342 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 DPP3Q9NY33 737 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 CACNG4Q9UBN1 327 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 PARP2Q9UGN5 583 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 CHORDC1Q9UHD1 332 aaPredicted RBP4.44□□□□□ -1.7
MCF2-201ENST00000338585 AGAP1Q9UPQ3 857 aa4.44□□□□□ -1.7
MCF2-201ENST00000338585 SMIM28A0A1B0GU29 152 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 NCK2O43639 380 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CABYRO75952 493 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TUBB4AP04350 444 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 H2AFZP0C0S5 128 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 HSPA6P17066 643 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 ANXA13P27216 316 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 YARSP54577 528 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 NAP1L1P55209 391 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 POU5F1Q01860 360 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 SOX4Q06945 474 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 PTK7Q13308 1070 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 LPIN1Q14693 890 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 MBTPS1Q14703 1052 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 NAA30Q147X3 362 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 ZBTB6Q15916 424 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PTPROQ16827 1216 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TRAF7Q6Q0C0 670 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 H2AFVQ71UI9 128 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PASD1Q8IV76 773 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 FMNL3Q8IVF7 1028 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 LPPQ93052 612 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 HPDLQ96IR7 371 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TSEN34Q9BSV6 310 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 THAP2Q9H0W7 228 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 L2HGDHQ9H9P8 463 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 ERVK-5Q9HDB9 667 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 OSGEPQ9NPF4 335 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CNTN3Q9P232 1028 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 MYO1AQ9UBC5 1043 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 HMGXB4Q9UGU5 601 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PADI3Q9ULW8 664 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PHF24Q9UPV7 400 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CNTN6Q9UQ52 1028 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 C2CD2Q9Y426 696 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PCDHB2Q9Y5E7 798 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 MYH10P35580 1976 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 SCN1AP35498 2009 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 UQCRHLA0A096LP55 91 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CTAGE9A4FU28 777 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 KBTBD13C9JR72 458 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PTGESO14684 152 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 SRGAP2O75044 1071 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PALMO75781 387 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 FTCDO95954 541 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 FTLP02792 175 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 UQCRHP07919 91 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CKBP12277 381 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 CCL5P13501 91 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 IGFBP6P24592 240 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 GNA15P30679 374 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 ZNF132P52740 706 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 AMPD2Q01433 879 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 C2CD6Q53TS8 623 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 ZNF667Q5HYK9 610 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 C10orf76Q5T2E6 689 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 LLGL2Q6P1M3 1020 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 APBB1IPQ7Z5R6 666 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 SLC43A3Q8NBI5 491 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 MYRIPQ8NFW9 859 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 WHAMMQ8TF30 809 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TFAP2BQ92481 460 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 FAM81BQ96LP2 452 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 TWNKQ96RR1 684 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PSMB7Q99436 277 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 NAPGQ99747 312 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 BCO2Q9BYV7 579 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 RNF208Q9H0X6 261 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 ISCUQ9H1K1 167 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PLEKHA5Q9HAU0 1116 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 LUC7LQ9NQ29 371 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 PAK6Q9NQU5 681 aaPredicted RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 FAM105AQ9NUU6 356 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 PUF60Q9UHX1 559 aaKnown RBP4.43□□□□□ -1.7
MCF2-201ENST00000338585 ITGA11Q9UKX5 1188 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 RALGAPA2Q2PPJ7 1873 aa4.43□□□□□ -1.7
MCF2-201ENST00000338585 A0A0U1RQG5 324 aaPredicted RBP4.42□□□□□ -1.7
MCF2-201ENST00000338585 GRID2IPA4D2P6 1211 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 ARVCFO00192 962 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 GPR182O15218 404 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 SPTLC1O15269 473 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 THAP12O43422 761 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 TACC1O75410 805 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 TMEM253P0C7T8 217 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 BRD2P25440 801 aaKnown RBP4.42□□□□□ -1.7
MCF2-201ENST00000338585 MLH1P40692 756 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 NOP2P46087 812 aaKnown RBP4.42□□□□□ -1.7
MCF2-201ENST00000338585 RBP5P82980 135 aa4.42□□□□□ -1.7
MCF2-201ENST00000338585 PTPN11Q06124 597 aaPredicted RBP4.42□□□□□ -1.7
MCF2-201ENST00000338585 PAK2Q13177 524 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms