RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 B4GALT5O43286 388 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 LGR5O75473 907 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 POTEJP0CG39 1038 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 RALAP11233 206 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 SSR1P43307 286 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 ZNF132P52740 706 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 TFAMQ00059 246 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 KCTD2Q14681 263 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 PLEKHA7Q6IQ23 1121 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 SCARA5Q6ZMJ2 495 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 DHX37Q8IY37 1157 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 ANKRD13AQ8IZ07 590 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 UBR7Q8N806 425 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 CEP120Q8N960 986 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 TCP11Q8WWU5 503 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 ART4Q93070 314 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 RUNDC3BQ96NL0 473 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 MMP19Q99542 508 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 EPN3Q9H201 632 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 PARP2Q9UGN5 583 aa15.81■□□□□ 0.12
CLCNKA-201ENST00000331433 IGKV6-21A0A0C4DH24 114 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 SPDYE5A6NIY4 337 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 SMIM23A6NLE4 172 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CXCL11O14625 94 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 TLR3O15455 904 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 NUDT17P0C025 328 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 BRD2P25440 801 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 GBP1P32455 592 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 EIF3BP55884 814 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 RPL7AP62424 266 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 TRIP13Q15645 432 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CCDC25Q86WR0 208 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 ARFGAP2Q8N6H7 521 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 MRPL47Q9HD33 250 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CPSF3Q9UKF6 684 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 INO80B-WBP1J3KQ70 363 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 EBAG9O00559 213 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 WEE2P0C1S8 567 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CLCN3P51790 818 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 PPP2R2AP63151 447 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 MCL1Q07820 350 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 MOGSQ13724 837 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 ANKS1BQ7Z6G8 1248 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CDCA5Q96FF9 252 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 MPHOSPH6Q99547 160 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 INO80BQ9C086 356 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 KLHL11Q9NVR0 708 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 ASIC3Q9UHC3 531 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 EVPLQ92817 2033 aa15.8■□□□□ 0.12
CLCNKA-201ENST00000331433 DNAJC25-GNG10A0A024R161 153 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TLDC2A0PJX2 215 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TP73O15350 636 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 DUOXA2Q1HG44 320 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 PLPPR4Q7Z2D5 763 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 OPTNQ96CV9 577 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 DCLK3Q9C098 648 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 FAM107BQ9H098 131 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 PPANQ9NQ55 473 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 SCINQ9Y6U3 715 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 HOXC6P09630 235 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TXNP10599 105 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TCF4P15884 667 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 MMP8P22894 467 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 AP3M2P53677 418 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 CALCOCO2Q13137 446 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TRPC3Q13507 836 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TMEM132AQ24JP5 1023 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 ZNF568Q3ZCX4 644 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 EEF1DP3Q658K8 133 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 RHOT1Q8IXI2 618 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 TMEM130Q8N3G9 435 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 SLCO2A1Q92959 643 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 CCDC114Q96M63 670 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 NIF3L1Q9GZT8 377 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 KCNH4Q9UQ05 1017 aa15.79■□□□□ 0.12
CLCNKA-201ENST00000331433 PSTPIP1O43586 416 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 GRM1Q13255 1194 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 ATP13A4Q4VNC1 1196 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 GJC2Q5T442 439 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 ATF7IP2Q5U623 682 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 KCNV1Q6PIU1 500 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 MPZL3Q6UWV2 235 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 HOOK3Q86VS8 718 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 TMEM192Q8IY95 271 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 FEZF2Q8TBJ5 459 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 TLCD1Q96CP7 247 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 PARVAQ9NVD7 372 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 PPME1Q9Y570 386 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 MGAMO43451 1857 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 E7EVH7 732 aa15.78■□□□□ 0.12
CLCNKA-201ENST00000331433 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms