RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PTF1AQ7RTS3 328 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.75■■□□□ 1.07
CMTM4-201ENST00000330687 ERMNQ8TAM6 284 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 BLOC1S6Q9UL45 172 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 TGFB1I1O43294 461 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 ITGA2BP08514 1039 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 BGNP21810 368 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 ASPHQ12797 758 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 RASA2Q15283 850 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 SIX1Q15475 284 aaPredicted RBP21.75■■□□□ 1.07
CMTM4-201ENST00000330687 RNF168Q8IYW5 571 aaPredicted RBP21.75■■□□□ 1.07
CMTM4-201ENST00000330687 GLIS1Q8NBF1 620 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 SHKBP1Q8TBC3 707 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 OLFM3Q96PB7 478 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
CMTM4-201ENST00000330687 ECE2O60344 883 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 KRT10P13645 584 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 ANXA13P27216 316 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 SSTR1P30872 391 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 C11orf63Q6NUN7 778 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 FAM178BQ8IXR5 827 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 ACSF2Q96CM8 615 aaPredicted RBP21.74■■□□□ 1.07
CMTM4-201ENST00000330687 FAM84AQ96KN4 292 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 C10orf88Q9H8K7 445 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 CETN1Q12798 172 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 SCUBE1Q8IWY4 988 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 GRK7Q8WTQ7 553 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 RBM17Q96I25 401 aaKnown RBP21.74■■□□□ 1.07
CMTM4-201ENST00000330687 FAM111AQ96PZ2 611 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 TMEM117Q9H0C3 514 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 COMMD3-BMI1R4GMX3 469 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 KIF1AQ12756 1690 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 SLURP2P0DP57 97 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 TRIP10Q15642 601 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 ODR4Q5SWX8 454 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 NOP9Q86U38 636 aaKnown RBP21.74■■□□□ 1.07
CMTM4-201ENST00000330687 GSTCDQ8NEC7 633 aa21.74■■□□□ 1.07
CMTM4-201ENST00000330687 LENG1Q96BZ8 264 aaPredicted RBP21.74■■□□□ 1.07
CMTM4-201ENST00000330687 UMODL1Q5DID0 1318 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 MYOCOSA0A1B0GUC4 107 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ADGRF4Q8IZF3 695 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 CCDC89Q8N998 374 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 FHDC1Q9C0D6 1143 aaPredicted RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 LRRC19Q9H756 370 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 SAR1AQ9NR31 198 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 KAT6AQ92794 2004 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ZMYM2Q9UBW7 1377 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ARL4CP56559 192 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 SH2D4BQ5SQS7 431 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 RBM44Q6ZP01 1051 aaKnown RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ZNF804AQ7Z570 1209 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 RBM15BQ8NDT2 890 aaKnown RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 OSBPL8Q9BZF1 889 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 GPR88Q9GZN0 384 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 IQCGQ9H095 443 aaKnown RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 PKD2L1Q9P0L9 805 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 PACSIN3Q9UKS6 424 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 PDE5AO76074 875 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 ABCD1P33897 745 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 LSAMPQ13449 338 aa21.73■■□□□ 1.07
CMTM4-201ENST00000330687 SDCCAG8Q86SQ7 713 aaPredicted RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 SMG5Q9UPR3 1016 aaKnown RBP21.73■■□□□ 1.07
CMTM4-201ENST00000330687 RHBDF2Q6PJF5 856 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 POU5F2Q8N7G0 328 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 DCLK3Q9C098 648 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 ARHGEF38Q9NXL2 777 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 KANSL3Q9P2N6 904 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 TMCO1Q9UM00 188 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 TMCC1O94876 653 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 ARSEP51690 589 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 UBXN2AP68543 259 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 PABPC1LQ4VXU2 614 aaKnown RBP21.72■■□□□ 1.07
CMTM4-201ENST00000330687 SMC1BQ8NDV3 1235 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 DHX38Q92620 1227 aaKnown RBP21.72■■□□□ 1.07
CMTM4-201ENST00000330687 GRIP2Q9C0E4 1043 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 ZNF804BA4D1E1 1349 aa21.72■■□□□ 1.07
CMTM4-201ENST00000330687 IVDP26440 423 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 CTC1Q2NKJ3 1217 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 RABGAP1LQ5R372 815 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 IYDQ6PHW0 289 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 ARL10Q8N8L6 244 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 CYP2W1Q8TAV3 490 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 GCNAQ96QF7 691 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 COQ9O75208 318 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 DYNLT1P63172 113 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 NCOA4Q13772 614 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 CPA5Q8WXQ8 436 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 ZNF395Q9H8N7 513 aaPredicted RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 LGALS13Q9UHV8 139 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 APPL1Q9UKG1 709 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 ATXN3P54252 364 aaPredicted RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 ADARP55265 1226 aaKnown RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 DLG1Q12959 904 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 CMPK2Q5EBM0 449 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 SESTD1Q86VW0 696 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms