RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GRM5P41594 1212 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 PLA2G4AP47712 749 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 PEX5P50542 639 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 KRT35Q92764 455 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 KRT12Q99456 494 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 CXCL16Q9H2A7 254 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 NXF1Q9UBU9 619 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 TRIP12Q14669 1992 aaPredicted RBP18.09■□□□□ 0.49
DDX41-201ENST00000330503 MAP2K7O14733 419 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 NPTXRO95502 500 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 MYBL1P10243 752 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 PSMC4P43686 418 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 NSFP46459 744 aaKnown RBP18.09■□□□□ 0.49
DDX41-201ENST00000330503 GUCY2FP51841 1108 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 PURAQ00577 322 aaKnown RBP18.09■□□□□ 0.49
DDX41-201ENST00000330503 PTP4A2Q12974 167 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 CATSPER4Q7RTX7 472 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 PHF13Q86YI8 300 aaPredicted RBP18.09■□□□□ 0.49
DDX41-201ENST00000330503 ADPGKQ9BRR6 497 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 AP1M1Q9BXS5 423 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 BCO2Q9BYV7 579 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 TRIM7Q9C029 511 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 SDCBP2Q9H190 292 aa18.09■□□□□ 0.49
DDX41-201ENST00000330503 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 MIF4GDA9UHW6 222 aaKnown RBP18.08■□□□□ 0.49
DDX41-201ENST00000330503 ITGA4P13612 1032 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 AKR1A1P14550 325 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 BRD2P25440 801 aaKnown RBP18.08■□□□□ 0.49
DDX41-201ENST00000330503 HOXC8P31273 242 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 RAP1GAPP47736 663 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 MARCKSL1P49006 195 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 CBX1P83916 185 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 TMEM132DQ14C87 1099 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 ZNF394Q53GI3 561 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 C8orf74Q6P047 294 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 TFAP2BQ92481 460 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 EIF2AQ9BY44 585 aaKnown RBP18.08■□□□□ 0.49
DDX41-201ENST00000330503 CARD9Q9H257 536 aa18.08■□□□□ 0.49
DDX41-201ENST00000330503 DUSP11O75319 330 aaKnown RBP18.08■□□□□ 0.48
DDX41-201ENST00000330503 CDH8P55286 799 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 ZNF211Q13398 564 aaPredicted RBP18.08■□□□□ 0.48
DDX41-201ENST00000330503 WDR72Q3MJ13 1102 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 ZNF667Q5HYK9 610 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 TMEM40Q8WWA1 233 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 RUBCNQ92622 972 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 TRIM11Q96F44 468 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 HHIPL1Q96JK4 782 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 ADAM22Q9P0K1 906 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 STIM2Q9P246 746 aa18.08■□□□□ 0.48
DDX41-201ENST00000330503 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 GLI1P08151 1106 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 CYBAP13498 195 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 ATICP31939 592 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 CAP1Q01518 475 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 CYP4F22Q6NT55 531 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 SLC27A1Q6PCB7 646 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 TRIB2Q92519 343 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 FAXDC2Q96IV6 333 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 VCPIP1Q96JH7 1222 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 C11orf70Q9BRQ4 267 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 WNT8AQ9H1J5 351 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 VRTNQ9H8Y1 702 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 SNTG2Q9NY99 539 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 C2CD2Q9Y426 696 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 C17orf102A2RUQ5 167 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 KRIT1O00522 736 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 KIF3CO14782 793 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 FGGP02679 453 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 EIF4BP23588 611 aaKnown RBP18.07■□□□□ 0.48
DDX41-201ENST00000330503 POLR2BP30876 1174 aaKnown RBP18.07■□□□□ 0.48
DDX41-201ENST00000330503 FCGRTP55899 365 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 AADACL2Q6P093 401 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 KLHL7Q8IXQ5 586 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 GSPT2Q8IYD1 628 aaKnown RBP18.07■□□□□ 0.48
DDX41-201ENST00000330503 WDTC1Q8N5D0 677 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 WHAMMQ8TF30 809 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 RNPC3Q96LT9 517 aaKnown RBP18.07■□□□□ 0.48
DDX41-201ENST00000330503 KATNAL1Q9BW62 490 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 DPP3Q9NY33 737 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 AGAP1Q9UPQ3 857 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 NR2E1Q9Y466 385 aa18.07■□□□□ 0.48
DDX41-201ENST00000330503 RAD51CO43502 376 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 CTNNA2P26232 953 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 FLT3LGP49771 235 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 GJA9P57773 515 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 TNNC1P63316 161 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 LACTBP83111 547 aaPredicted RBP18.06■□□□□ 0.48
DDX41-201ENST00000330503 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
DDX41-201ENST00000330503 SNX17Q15036 470 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDX41-201ENST00000330503 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 HDXQ7Z353 690 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 UBL4BQ8N7F7 174 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 UBE2Q2Q8WVN8 375 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 SMYD3Q9H7B4 428 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 ANAPC7Q9UJX3 599 aa18.06■□□□□ 0.48
DDX41-201ENST00000330503 PCDHA3Q9Y5H8 950 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms