RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 SMIM28A0A1B0GU29 152 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 P4HA1P13674 534 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 YWHAEP62258 255 aaKnown RBP23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 ZBTB6Q15916 424 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 HACE1Q8IYU2 909 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 TRIM58Q8NG06 486 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 C18orf25Q96B23 403 aaPredicted RBP23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 ALS2CR12Q96Q35 445 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 UBQLN1Q9UMX0 589 aaKnown RBP23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 CITO14578 2027 aa23.21■■□□□ 1.31
TOP1MT-201ENST00000329245 ABCB4P21439 1286 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 GNA15P30679 374 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 MYO1EQ12965 1108 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 ZNF677Q86XU0 584 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 UBR7Q8N806 425 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 FAXDC2Q96IV6 333 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 PDCL3Q9H2J4 239 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 VRTNQ9H8Y1 702 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 TUBGCP4Q9UGJ1 667 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 PUF60Q9UHX1 559 aaKnown RBP23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 CAPN6Q9Y6Q1 641 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 FTLP02792 175 aaPredicted RBP23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 C1QTNF8P60827 252 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 ZNF394Q53GI3 561 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 USP38Q8NB14 1042 aa23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 CTNNBL1Q8WYA6 563 aaPredicted RBP23.2■■□□□ 1.3
TOP1MT-201ENST00000329245 ATP8B3O60423 1300 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 BTNL10A8MVZ5 291 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 XPOTO43592 962 aaKnown RBP23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 RTN2O75298 545 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 GZMAP12544 262 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 ITGA4P13612 1032 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 NOP2P46087 812 aaKnown RBP23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 XKR4Q5GH76 650 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 TSPAN18Q96SJ8 248 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 SEZ6LQ9BYH1 1024 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 FRMPD3Q5JV73 1810 aa23.19■■□□□ 1.3
TOP1MT-201ENST00000329245 TLR3O15455 904 aaKnown RBP23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 KCNE1P15382 129 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 RAP1GAPP47736 663 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 TNNC1P63316 161 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 MMS19Q96T76 1030 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 BCO2Q9BYV7 579 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 ISCUQ9H1K1 167 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 SQORQ9Y6N5 450 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 ANKRD62A6NC57 917 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 ENC1O14682 589 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 THAP12O43422 761 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 TMEM253P0C7T8 217 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 CDH8P55286 799 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 OGDHLQ9ULD0 1010 aa23.18■■□□□ 1.3
TOP1MT-201ENST00000329245 STAU1O95793 577 aaKnown RBP23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 CD4P01730 458 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 CDK7P50613 346 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 ZNF132P52740 706 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 LRRN4CLQ8ND94 238 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 THAP2Q9H0W7 228 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 SMYD3Q9H7B4 428 aa23.17■■□□□ 1.3
TOP1MT-201ENST00000329245 IBSPP21815 317 aaPredicted RBP23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 C9orf57Q5W0N0 161 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 ZFP42Q96MM3 310 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 CARD6Q9BX69 1037 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 CYP3A43Q9HB55 503 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 CEP350Q5VT06 3117 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 MEIS3P2A8K0S8 358 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 MGEA5O60502 916 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 ATF7P17544 494 aaPredicted RBP23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 IFI16Q16666 785 aaKnown RBP23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 LPPQ93052 612 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 ADAM2Q99965 735 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 SDCBP2Q9H190 292 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 JRKLQ9Y4A0 524 aa23.16■■□□□ 1.3
TOP1MT-201ENST00000329245 A0A0A6YYK5 440 aaPredicted RBP23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 PPEF2O14830 753 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 ATP1A1P05023 1023 aaKnown RBP23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 RAB27AP51159 221 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 AMPD2Q01433 879 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 CLEC16AQ2KHT3 1053 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 ACAD10Q6JQN1 1059 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 LRRC52Q8N7C0 313 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 RNF169Q8NCN4 708 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 CAGE1Q8TC20 777 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 ZNF606Q8WXB4 792 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 CDC23Q9UJX2 597 aa23.15■■□□□ 1.3
TOP1MT-201ENST00000329245 PALMO75781 387 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 CYP3A5P20815 502 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 SSTR3P32745 418 aaPredicted RBP23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 MLH1P40692 756 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 NAA30Q147X3 362 aaPredicted RBP23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 FAM126BQ8IXS8 530 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 MNS1Q8NEH6 495 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 RPS6KC1Q96S38 1066 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 SNX9Q9Y5X1 595 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 RALGAPA2Q2PPJ7 1873 aa23.14■■□□□ 1.3
TOP1MT-201ENST00000329245 TRIP11Q15643 1979 aa23.14■■□□□ 1.29
TOP1MT-201ENST00000329245 GPC5P78333 572 aa23.14■■□□□ 1.29
TOP1MT-201ENST00000329245 DSC3Q14574 896 aa23.14■■□□□ 1.29
TOP1MT-201ENST00000329245 SMYD5Q6GMV2 418 aa23.14■■□□□ 1.29
TOP1MT-201ENST00000329245 TRAF7Q6Q0C0 670 aa23.14■■□□□ 1.29
TOP1MT-201ENST00000329245 DNAJC5GQ8N7S2 189 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms