RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 POMCP01189 267 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ALAS1P13196 640 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 DDX6P26196 483 aaKnown RBP eCLIP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ZFP36P26651 326 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 GUCY1B3Q02153 619 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 TAP1Q03518 808 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 SMN1Q16637 294 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 FAM102AQ5T9C2 384 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ARHGEF19Q8IW93 802 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 RHOT2Q8IXI1 618 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 CPEB3Q8NE35 698 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 C7orf25Q9BPX7 421 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 LDAHQ9H6V9 325 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 C11orf21Q9P2W6 132 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 DMRT1Q9Y5R6 373 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 COL5A3P25940 1745 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 MYO16Q9Y6X6 1858 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ADGRB3O60242 1522 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 DRGXA6NNA5 263 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 ZNF185O15231 689 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 GCP02774 474 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 KRT4P19013 534 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 ALDH1A3P47895 512 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 AVPR1BP47901 424 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 SLC16A1P53985 500 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 USP14P54578 494 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 BLOC1S1P78537 153 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 SPDYE7PQ495Y7 208 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 AGAP9Q5VTM2 703 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 OTUD7BQ6GQQ9 843 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 PGM2L1Q6PCE3 622 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 Q6ZPA2 131 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 SEM1Q6ZVN7 128 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 MED25Q71SY5 747 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 MIGA2Q7L4E1 593 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 LCORLQ8N3X6 602 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 OR56A1Q8NGH5 318 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 FUBP3Q96I24 572 aaKnown RBP eCLIP2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 GLI3P10071 1580 aa2.15□□□□□ -2.06
CCDC144A-201ENST00000328495 LPXNO60711 386 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 IARSP41252 1262 aaKnown RBP2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 PTTG1IPP53801 180 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SEPT2Q15019 361 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 ZNF529Q6P280 563 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SUPT20HQ8NEM7 779 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 CCHCR1Q8TD31 782 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 RNPEPQ9H4A4 650 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SERHL2Q9H4I8 314 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 MRFAP1Q9Y605 127 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SBNO2Q9Y2G9 1366 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 GRID2IPA4D2P6 1211 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 MARCH11A6NNE9 402 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 ALG1L2C9J202 215 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 CDKL5O76039 1030 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 MT-CO1P00395 513 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 GUCY2FP51841 1108 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 CREMQ03060 361 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 ACAP2Q15057 778 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 HECTD2Q5U5R9 776 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SYDE2Q5VT97 1194 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 PCSK4Q6UW60 755 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 VRK3Q8IV63 474 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 MAPKAPK5Q8IW41 473 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 PPM1NQ8N819 430 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 C1orf162Q8NEQ5 155 aaPredicted RBP2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 NRG4Q8WWG1 115 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 STON2Q8WXE9 905 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 MTMR8Q96EF0 704 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC2A13Q96QE2 648 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 AGAP2Q99490 1192 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 TEX101Q9BY14 249 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 WDR11Q9BZH6 1224 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 KLHL11Q9NVR0 708 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 FAM30AQ9NZY2 134 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 ANKFY1Q9P2R3 1169 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 PACSIN3Q9UKS6 424 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 SIK3Q9Y2K2 1263 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 NOX1Q9Y5S8 564 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 ACTL7AQ9Y615 435 aa2.15□□□□□ -2.07
CCDC144A-201ENST00000328495 DHX57Q6P158 1386 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 SHTN1A0MZ66 631 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 TNRC18O15417 2968 aaPredicted RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 XPOTO43592 962 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 PPFIA2O75334 1257 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 FOSP01100 380 aaPredicted RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 CFIP05156 583 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 HKR1P10072 659 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 CDK11BP21127 795 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 FPR1P21462 350 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 PCSK1P29120 753 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ZEB1P37275 1124 aaPredicted RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 WASP42768 502 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC6A9P48067 706 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 RESTQ13127 1097 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 MTM1Q13496 603 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 UBXN2BQ14CS0 331 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 INAVAQ3KP66 663 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 TSHZ3Q63HK5 1081 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 METRNLQ641Q3 311 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms