RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 ARHGEF18Q6ZSZ5 1173 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 ABRAQ8N0Z2 381 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 GRAMD1AQ96CP6 724 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 OSBPL8Q9BZF1 889 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 MAF1Q9H063 256 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 XPNPEP1Q9NQW7 623 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 TCP11X1B4DZS4 312 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 PIGRP01833 764 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.97
SOX2-201ENST00000325404 CETN2P41208 172 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 NR1H3Q13133 447 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 PPP1R21Q6ZMI0 780 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 SULF1Q8IWU6 871 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 CDHR1Q96JP9 859 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 MAGEB18Q96M61 343 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 EURLQ9NYK6 297 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 R3HDM2Q9Y2K5 976 aaKnown RBP21.1■□□□□ 0.97
SOX2-201ENST00000325404 ARL2BPQ9Y2Y0 163 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 USP2O75604 605 aaPredicted RBP21.09■□□□□ 0.97
SOX2-201ENST00000325404 BRAFP15056 766 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 KCNA2P16389 499 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 NOMO3P69849 1222 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 NEDD9Q14511 834 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 C9orf131Q5VYM1 1079 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 HIBCHQ6NVY1 386 aaPredicted RBP21.09■□□□□ 0.97
SOX2-201ENST00000325404 BICD1Q96G01 975 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 FNBP1Q96RU3 617 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 PRKAG3Q9UGI9 489 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 ARID2Q68CP9 1835 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 NDC80O14777 642 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 NR3C2P08235 984 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 KLRC2P26717 231 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 MAMLD1Q13495 774 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 ZCCHC9Q8N567 271 aaKnown RBP21.09■□□□□ 0.97
SOX2-201ENST00000325404 WNK4Q96J92 1243 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 CYP26B1Q9NR63 512 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 AFG3L2Q9Y4W6 797 aa21.09■□□□□ 0.97
SOX2-201ENST00000325404 ATP6V1G2O95670 118 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 TBXAS1P24557 533 aaPredicted RBP21.08■□□□□ 0.97
SOX2-201ENST00000325404 DSG3P32926 999 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 CUL2Q13617 745 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 ZNF268Q14587 947 aaPredicted RBP21.08■□□□□ 0.97
SOX2-201ENST00000325404 UBN1Q9NPG3 1134 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 FGFR1OP2Q9NVK5 253 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.97
SOX2-201ENST00000325404 POLR2AP24928 1970 aaKnown RBP21.08■□□□□ 0.96
SOX2-201ENST00000325404 STAM2O75886 525 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 LIG4P49917 911 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 SLC18A1P54219 525 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 OAZ1P54368 228 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 SLFN12LQ6IEE8 588 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 SPATA21Q7Z572 469 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 ANKRD35Q8N283 1001 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 RNF146Q9NTX7 359 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 ABCF3Q9NUQ8 709 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 MCM8Q9UJA3 840 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 NAALADL1Q9UQQ1 740 aa21.08■□□□□ 0.96
SOX2-201ENST00000325404 A0A1B0GUA9 196 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 LDHAP00338 332 aaKnown RBP21.07■□□□□ 0.96
SOX2-201ENST00000325404 EZRP15311 586 aaKnown RBP21.07■□□□□ 0.96
SOX2-201ENST00000325404 BNIP1Q12981 228 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 STRN3Q13033 797 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 LRRC38Q5VT99 294 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 TDRD10Q5VZ19 366 aaKnown RBP21.07■□□□□ 0.96
SOX2-201ENST00000325404 IZUMO3Q5VZ72 239 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 TDRPQ86YL5 185 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 RCOR2Q8IZ40 523 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 KCNK9Q9NPC2 374 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 NKIRAS1Q9NYS0 192 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 PHIPQ8WWQ0 1821 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 PIK3CAP42336 1068 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 BAATQ14032 418 aaPredicted RBP21.07■□□□□ 0.96
SOX2-201ENST00000325404 XKR3Q5GH77 459 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 NUGGCQ68CJ6 796 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 CATSPERGQ6ZRH7 1159 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 REPS2Q8NFH8 660 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 TTC25Q96NG3 672 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 POLR3FQ9H1D9 316 aaPredicted RBP21.07■□□□□ 0.96
SOX2-201ENST00000325404 PPCSQ9HAB8 311 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 PARVAQ9NVD7 372 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 IP6K2Q9UHH9 426 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 ADAMTS5Q9UNA0 930 aa21.07■□□□□ 0.96
SOX2-201ENST00000325404 WDR81Q562E7 1941 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 ADM5C9JUS6 153 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 CREB1P16220 341 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 TNNI1P19237 187 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 TAS2R40P59535 323 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 MCL1Q07820 350 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 CCDC15Q0P6D6 951 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 ACVR2BQ13705 512 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 VGLL4Q14135 290 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 MPP2Q14168 576 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 LRRC14Q15048 493 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 TRIP13Q15645 432 aaPredicted RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 RNF43Q68DV7 783 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 SWSAP1Q6NVH7 229 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 ABHD15Q6UXT9 468 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 ANKS1BQ7Z6G8 1248 aa21.06■□□□□ 0.96
SOX2-201ENST00000325404 RBM41Q96IZ5 413 aaKnown RBP21.06■□□□□ 0.96
SOX2-201ENST00000325404 CFAP57Q96MR6 1250 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms