RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 MMS19Q96T76 1030 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 HMGXB4Q9UGU5 601 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 R3HCC1Q9Y3T6 440 aaKnown RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 TTC3P53804 2025 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 TBKBP1A7MCY6 615 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 ZBBXA8MT70 800 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 PODXLO00592 558 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 CYP26A1O43174 497 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 ACO1P21399 889 aaKnown RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 GCNT1Q02742 428 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 FPGSQ05932 587 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 ABI1Q8IZP0 508 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 TNS4Q8IZW8 715 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 PANX2Q96RD6 677 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.39■□□□□ 0.217e-7■■□□□ 11.9
PRPF3-201ENST00000324862 ELAC1Q9H777 363 aaKnown RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 UBN1Q9NPG3 1134 aa16.39■□□□□ 0.21
PRPF3-201ENST00000324862 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
PRPF3-201ENST00000324862 CHD7Q9P2D1 2997 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 KRT5P13647 590 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 SSTR3P32745 418 aaPredicted RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 SOX5P35711 763 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 MFAP3P55082 362 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 LILRA4P59901 499 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 GRIK3Q13003 919 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 UPP1Q16831 310 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 RAD9BQ6WBX8 426 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 SHC3Q92529 594 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 TNRC18O15417 2968 aaPredicted RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 CYP3A5P20815 502 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 LRPAP1P30533 357 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 CLCN1P35523 988 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 RNASELQ05823 741 aaKnown RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 SLC47A2Q86VL8 602 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 SLC38A7Q9NVC3 462 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
PRPF3-201ENST00000324862 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
PRPF3-201ENST00000324862 MICAL3Q7RTP6 2002 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 NT5C1B-RDH14C9J2C7 533 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 XPOTO43592 962 aaKnown RBP16.37■□□□□ 0.21
PRPF3-201ENST00000324862 B3GAT3O94766 335 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 TUSC3Q13454 348 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 MEA1Q16626 185 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 CD300LGQ6UXG3 332 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 NPAS4Q8IUM7 802 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 TWNKQ96RR1 684 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
PRPF3-201ENST00000324862 DESI2Q9BSY9 194 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 HAUS4Q9H6D7 363 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 PDCD11Q14690 1871 aaKnown RBP16.37■□□□□ 0.21
PRPF3-201ENST00000324862 ABHD14A-ACY1A0A1B0GW23 586 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 KPNA7A9QM74 516 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 INPPL1O15357 1258 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 STAT1P42224 750 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 BRCC3P46736 316 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 PTK2Q05397 1052 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 MYO1EQ12965 1108 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 ASIC2Q16515 512 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
PRPF3-201ENST00000324862 COLGALT2Q8IYK4 626 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 SLC20A1Q8WUM9 679 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 AIPL1Q9NZN9 384 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 PCDHB4Q9Y5E5 795 aa16.37■□□□□ 0.21
PRPF3-201ENST00000324862 KIF4AO95239 1232 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 ATICP31939 592 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 HNRNPH3P31942 346 aaKnown RBP16.36■□□□□ 0.21
PRPF3-201ENST00000324862 OR1G1P47890 313 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 DSC1Q08554 894 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 SOWAHAQ2M3V2 549 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TMEM240Q5SV17 173 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TMEM173Q86WV6 379 aaPredicted RBP16.36■□□□□ 0.21
PRPF3-201ENST00000324862 FAM71AQ8IYT1 594 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 LRRC52Q8N7C0 313 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 URGCPQ8TCY9 931 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 IQCDQ96DY2 449 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 SPTLC3Q9NUV7 552 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 A0A0U1RQJ8 604 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 DGKIO75912 1065 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 FGBP02675 491 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TAF6P49848 677 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TNNC1P63316 161 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
PRPF3-201ENST00000324862 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms