RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MMP19Q99542 508 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 WNT8AQ9H1J5 351 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CPB1P15086 417 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TFE3P19532 575 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 ETFBP38117 255 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 VAMP7P51809 220 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 PPP1R2P3Q6NXS1 205 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SYTL1Q8IYJ3 562 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 NOL6Q9H6R4 1146 aaKnown RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 FAM47DPA6NHR8 397 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 JAK3P52333 1124 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 ARHGEF6Q15052 776 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 FAM117BQ6P1L5 589 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ST13P5Q8NFI4 369 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 MAGEB5Q9BZ81 275 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 C6orf62Q9GZU0 229 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SOAT1P35610 550 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CENPTQ96BT3 561 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 PNKPQ96T60 521 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DYRK4Q9NR20 520 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TJP2Q9UDY2 1190 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ALBP02768 609 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 XXYLT1Q8NBI6 393 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CPA5Q8WXQ8 436 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 MOV10L1Q9BXT6 1211 aaKnown RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 GCOM2Q9BZD3 368 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 IP6K2Q9UHH9 426 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ARAP3Q8WWN8 1544 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 RNF103O00237 685 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 C21orf2O43822 256 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 NUDT2P50583 147 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CCZ1BP86790 482 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CCZ1P86791 482 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 ALFQ53S48 1182 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 WRNIP1Q96S55 665 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 GTF2A1LQ9UNN4 478 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ALOX12P18054 663 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 MCAMP43121 646 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DNAJC3Q13217 504 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TSC22D1Q15714 1073 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SNX30Q5VWJ9 437 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 HOMEZQ8IX15 550 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ANKRD49Q8WVL7 239 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 BPIFA3Q9BQP9 254 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DDX18Q9NVP1 670 aaKnown RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 ASAP2O43150 1006 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CTSHP09668 335 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 FCER1AP12319 257 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SULT1E1P49888 294 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 DNAL1Q4LDG9 190 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 UNC13DQ70J99 1090 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 EPS8L3Q8TE67 593 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 KCNB2Q92953 911 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 A8MXQ7 604 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 FKBP9O95302 570 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 PLA2G4AP47712 749 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 FKBP9P1Q75LS8 142 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.26□□□□□ -1.09
CIITA-201ENST00000324288 LXNQ9BS40 222 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 DMAP1Q9NPF5 467 aaPredicted RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 PNMA3Q9UL41 463 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 PCDHGB4Q9UN71 923 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 APC2O95996 2303 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 NNMTP40261 264 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 TPI1P60174 286 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 GTF2H3Q13889 308 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 LRIG3Q6UXM1 1119 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SCUBE1Q8IWY4 988 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CASKIN2Q8WXE0 1202 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 BFARQ9NZS9 450 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 DIS3Q9Y2L1 958 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 ABCA5Q8WWZ7 1642 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 MAGEA13PA6NCF6 341 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 SNPHO15079 494 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 ARL4DP49703 201 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 TFDP2Q14188 446 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 KYNUQ16719 465 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 WLSQ5T9L3 541 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 YAF2Q8IY57 180 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 GUCA1CO95843 209 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 OASLQ15646 514 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 C10orf53Q8N6V4 93 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 HES6Q96HZ4 224 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 CATSPER2Q96P56 530 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 COPRSQ9NQ92 184 aa8.26□□□□□ -1.09
CIITA-201ENST00000324288 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
CIITA-201ENST00000324288 EMSYQ7Z589 1322 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms