RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 CTSHP09668 335 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 ZSWIM1Q9BR11 485 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 PARD6BQ9BYG5 372 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 SDCBP2Q9H190 292 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 SRRDQ9UH36 339 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 AGAP1Q9UPQ3 857 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 STXBP5LQ9Y2K9 1186 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 BRD2P25440 801 aaKnown RBP28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 APLP1P51693 650 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 CCDC181Q5TID7 509 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 GPR161Q8N6U8 529 aaKnown RBP28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 PNKPQ96T60 521 aa28.19■■■□□ 2.1
TM6SF1-202ENST00000322019 KPNA6O60684 536 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 CRYBB1P53674 252 aaPredicted RBP28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 KYAT1Q16773 422 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 ZNF667Q5HYK9 610 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 CPNE8Q86YQ8 564 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 RHOT2Q8IXI1 618 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 NUP85Q9BW27 656 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 DPP3Q9NY33 737 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 KLK14Q9P0G3 267 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 CASP8AP2Q9UKL3 1982 aa28.18■■■□□ 2.1
TM6SF1-202ENST00000322019 H2AFXP16104 143 aaPredicted RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 MRPS25P82663 173 aaKnown RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 ZNF677Q86XU0 584 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 ZNF606Q8WXB4 792 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 RNF39Q9H2S5 420 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 HMGXB4Q9UGU5 601 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 RECQL4O94761 1208 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 CYP1A1P04798 512 aaPredicted RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 C18orf25Q96B23 403 aaPredicted RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 SNX27Q96L92 541 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 CELF4Q9BZC1 486 aaKnown RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 ABCB6Q9NP58 842 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 CNOT8Q9UFF9 292 aaKnown RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 TUBGCP4Q9UGJ1 667 aa28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 NOC2LQ9Y3T9 749 aaKnown RBP28.17■■■□□ 2.1
TM6SF1-202ENST00000322019 PPEF2O14830 753 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 VEGFBP49765 207 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 FAM228AQ86W67 206 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 SYCE1Q8N0S2 351 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 TFAP2BQ92481 460 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 TAF4BQ92750 862 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 HPDLQ96IR7 371 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 C2CD2Q9Y426 696 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 CDY2AQ9Y6F7 541 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 GRIN2DO15399 1336 aa28.16■■■□□ 2.1
TM6SF1-202ENST00000322019 CYP1A2P05177 515 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 MESDQ14696 234 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 UBXN11Q5T124 520 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 TAF2Q6P1X5 1199 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 MCOLN2Q8IZK6 566 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 SPATA4Q8NEY3 305 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 GTF3C4Q9UKN8 822 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 SPDYE4A6NLX3 237 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 NSFP46459 744 aaKnown RBP28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 CLCN6P51797 869 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 NOMO3P69849 1222 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 POU5F1Q01860 360 aaKnown RBP28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 NME8Q8N427 588 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 ZNF564Q8TBZ8 553 aaPredicted RBP28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 HINFPQ9BQA5 517 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 OSBPL7Q9BZF2 842 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 TRIM7Q9C029 511 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 AMFRQ9UKV5 643 aa28.15■■■□□ 2.1
TM6SF1-202ENST00000322019 RRM1P23921 792 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 MRPS6P82932 125 aaKnown RBP28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 HES6Q96HZ4 224 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 TWNKQ96RR1 684 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 C11orf70Q9BRQ4 267 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 BCO2Q9BYV7 579 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 ALG6Q9Y672 507 aa28.14■■■□□ 2.1
TM6SF1-202ENST00000322019 CENPCQ03188 943 aa28.14■■■□□ 2.09
TM6SF1-202ENST00000322019 CCSAPQ6IQ19 270 aaPredicted RBP28.14■■■□□ 2.09
TM6SF1-202ENST00000322019 KLHDC9Q8NEP7 349 aa28.14■■■□□ 2.09
TM6SF1-202ENST00000322019 RBM12Q9NTZ6 932 aaKnown RBP28.14■■■□□ 2.09
TM6SF1-202ENST00000322019 YARSP54577 528 aaKnown RBP28.13■■■□□ 2.09
TM6SF1-202ENST00000322019 RAET1EQ8TD07 263 aa28.13■■■□□ 2.09
TM6SF1-202ENST00000322019 ITGA11Q9UKX5 1188 aa28.13■■■□□ 2.09
TM6SF1-202ENST00000322019 HMGCRP04035 888 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 PAFAH1B1P43034 410 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 PCBP1Q15365 356 aaKnown RBP eCLIP28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 CFAP221Q4G0U5 840 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 MON1BQ7L1V2 547 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 REM2Q8IYK8 340 aaPredicted RBP28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 PARP2Q9UGN5 583 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 THSD7BQ9C0I4 1608 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 CEP104O60308 925 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 CHRNA1P02708 482 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 AXLP30530 894 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 HADHBP55084 474 aaKnown RBP28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 NKX3-2P78367 333 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 MMS22LQ6ZRQ5 1243 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 APBB1IPQ7Z5R6 666 aaPredicted RBP28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 ARRDC4Q8NCT1 418 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 ZNF446Q9NWS9 450 aa28.12■■■□□ 2.09
TM6SF1-202ENST00000322019 DDX3YO15523 660 aaKnown RBP28.11■■■□□ 2.09
TM6SF1-202ENST00000322019 MARCKSL1P49006 195 aa28.11■■■□□ 2.09
TM6SF1-202ENST00000322019 RBP5P82980 135 aa28.11■■■□□ 2.09
TM6SF1-202ENST00000322019 NFX1Q12986 1120 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms