RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 MROH7Q68CQ1 1323 aa10.9□□□□□ -0.66
GINS3-201ENST00000318129 GTPBP10A4D1E9 387 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 P4HA2O15460 535 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 B4GALT5O43286 388 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 MGRN1O60291 552 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 ADRB2P07550 413 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 THPOP40225 353 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 RWDD2BP57060 319 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 IFFO1Q0D2I5 559 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 XRCC4Q13426 336 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 IQCEQ6IPM2 695 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 ZNF662Q6ZS27 426 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 ZBTB33Q86T24 672 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 CCDC155Q8N6L0 562 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 CAGE1Q8TC20 777 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 RSRC1Q96IZ7 334 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 ZIM3Q96PE6 472 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 SENP6Q9GZR1 1112 aaPredicted RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 HAPLN2Q9GZV7 340 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 KIAA0100Q14667 2235 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 PMM2O15305 246 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 KRT14P02533 472 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 MDH1P40925 334 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 ITIH3Q06033 890 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 MGAT3Q09327 533 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 CETN1Q12798 172 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 PSMD6Q15008 389 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 EEF1DP3Q658K8 133 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 IQCKQ8N0W5 287 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 ZSWIM2Q8NEG5 633 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 SPDL1Q96EA4 605 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
GINS3-201ENST00000318129 LRRC1Q9BTT6 524 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
GINS3-201ENST00000318129 ANO9A1A5B4 782 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 GPR182O15218 404 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 TLR3O15455 904 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 B4GALT4O60513 344 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CHRNA1P02708 482 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CLTAP09496 248 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 HARSP12081 509 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 KRT9P35527 623 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 GJA8P48165 433 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 FMO5P49326 533 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 ACOT2P49753 483 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 AP3M2P53677 418 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 ACCSLQ4AC99 568 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 ANKRD20A8PQ5CZ79 823 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CCDC122Q5T0U0 273 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CRELD2Q6UXH1 353 aaPredicted RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 ZNF572Q7Z3I7 529 aaPredicted RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 BRSK2Q8IWQ3 736 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 USP38Q8NB14 1042 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 FNBP1Q96RU3 617 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CDT1Q9H211 546 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CHST12Q9NRB3 414 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 RBAKQ9NYW8 714 aaPredicted RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 CPSF3Q9UKF6 684 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 IL18RAPO95256 599 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 NR1D1P20393 614 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 APBA1Q02410 837 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 SLC27A1Q6PCB7 646 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 TAX1BP1Q86VP1 789 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 CREG2Q8IUH2 290 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 EHBP1Q8NDI1 1231 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 WNT8BQ93098 351 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 RPF1Q9H9Y2 349 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 EBF2Q9HAK2 575 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 TFR2Q9UP52 801 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 SIK3Q9Y2K2 1263 aa10.88□□□□□ -0.67
GINS3-201ENST00000318129 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
GINS3-201ENST00000318129 FAM189A1O60320 539 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 SNUPNO95149 360 aaKnown RBP10.87□□□□□ -0.67
GINS3-201ENST00000318129 FGFR4P22455 802 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 CLDN10P78369 228 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 BFSP2Q13515 415 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
GINS3-201ENST00000318129 FIGNQ5HY92 759 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 KIAA1328Q86T90 577 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 C3orf20Q8ND61 904 aa10.87□□□□□ -0.67
GINS3-201ENST00000318129 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
GINS3-201ENST00000318129 OR8K1Q8NGG5 319 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms