RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 MCOLN2Q8IZK6 566 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 TRIM6Q9C030 488 aaPredicted RBP11.14□□□□□ -0.63
COL3A1-202ENST00000317840 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 FSCN2O14926 492 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 MAPK13O15264 365 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 SLC1A1P43005 524 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 POLGP54098 1239 aaPredicted RBP11.14□□□□□ -0.63
COL3A1-202ENST00000317840 PDIA2Q13087 525 aaKnown RBP11.14□□□□□ -0.63
COL3A1-202ENST00000317840 UGCGQ16739 394 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 CEP128Q6ZU80 1094 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 MOB2Q70IA6 237 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 FITM2Q8N6M3 262 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 DEPTORQ8TB45 409 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 CKAP2Q8WWK9 683 aa11.14□□□□□ -0.63
COL3A1-202ENST00000317840 ZSCAN5DPP0CG00 497 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 ATP2A2P16615 1042 aaKnown RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 TGFB2P61812 414 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 LMNB2Q03252 620 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 MFSD5Q6N075 450 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 PALM2Q8IXS6 379 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 ATP6V0A1Q93050 837 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 RMDN2Q96LZ7 410 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 TMEM237Q96Q45 408 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 KLF6Q99612 283 aaPredicted RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 IQCGQ9H095 443 aaKnown RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 RXFP1Q9HBX9 757 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 SLC12A4Q9UP95 1085 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 GTF2BQ00403 316 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 ATP13A4Q4VNC1 1196 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 SPDL1Q96EA4 605 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 SLCO1B3Q9NPD5 702 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 A0A0G2JND7 137 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 O00370 1275 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 HLA-DRAP01903 254 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 CCND1P24385 295 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 RASSF2P50749 326 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 OSTNP61366 133 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 DNAJC24Q6P3W2 148 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 MAGEB18Q96M61 343 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 KIF9Q9HAQ2 790 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
COL3A1-202ENST00000317840 LAMB2P55268 1798 aa11.13□□□□□ -0.63
COL3A1-202ENST00000317840 ATP9AO75110 1047 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 TJP3O95049 919 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 TROVE2P10155 538 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 JAK3P52333 1124 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 BBS9Q3SYG4 887 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 CENPUQ71F23 418 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 TRPM4Q8TD43 1214 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PYROXD1Q8WU10 500 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 COL20A1Q9P218 1284 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 RGS17Q9UGC6 210 aaPredicted RBP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 C15orf41Q9Y2V0 281 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 WDR46O15213 610 aaKnown RBP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 NR3C2P08235 984 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PAX7P23759 505 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 KRT76Q01546 638 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 CYP24A1Q07973 514 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 CYP1B1Q16678 543 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ERICH1Q86X53 443 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PCDHA10Q9Y5I2 948 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 IVNS1ABPQ9Y6Y0 642 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PROSCO94903 275 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ADSSP30520 456 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PTK6Q13882 451 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 MPP2Q14168 576 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 SCARA5Q6ZMJ2 495 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 VPS52Q8N1B4 723 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 GRAMD1AQ96CP6 724 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 NPHS2Q9NP85 383 aa11.12□□□□□ -0.63
COL3A1-202ENST00000317840 K7ERI5 159 aa11.11□□□□□ -0.63
COL3A1-202ENST00000317840 ICAM1P05362 532 aa11.11□□□□□ -0.63
COL3A1-202ENST00000317840 MYBL1P10243 752 aa11.11□□□□□ -0.63
COL3A1-202ENST00000317840 ETS1P14921 441 aa11.11□□□□□ -0.63
COL3A1-202ENST00000317840 GPC3P51654 580 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms