RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TMEM266Q2M3C6 531 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 DHTKD1Q96HY7 919 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 APOEP02649 317 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 ITGA4P13612 1032 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 CNGA2Q16280 664 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC2A7Q6PXP3 512 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 TREML1Q86YW5 311 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 CCDC105Q8IYK2 499 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARHGAP20Q9P2F6 1191 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 MYH10P35580 1976 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
LDLRAD3-201ENST00000315571 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 PSMG1O95456 288 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 MMP13P45452 471 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 AP2B1P63010 937 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 SNAPC2Q13487 334 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC35G1Q2M3R5 365 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 TRIML2Q8N7C3 387 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 C12orf42Q96LP6 360 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 TBC1D23Q9NUY8 699 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 NDUFA13Q9P0J0 144 aa12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.43
LDLRAD3-201ENST00000315571 ZNF263O14978 683 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 CCDC22O60826 627 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 GSTA3Q16772 222 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 PARP6Q2NL67 630 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 GPKOWQ92917 476 aaPredicted RBP eCLIP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 CCDC188H7C350 402 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 RFWD3Q6PCD5 774 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 RGS9BPQ6ZS82 235 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 SLC15A3Q8IY34 581 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 ATXN2LQ8WWM7 1075 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
LDLRAD3-201ENST00000315571 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 ZBTB5O15062 677 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 OCM2P0CE71 109 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 PTPN4P29074 926 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 ZNF157P51786 506 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 SNAP25P60880 206 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 PKN1Q16512 942 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 CCDC153Q494R4 210 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 BTNL9Q6UXG8 535 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 GLG1Q92896 1179 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 ARMCX3Q9UH62 379 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 TBX10O75333 385 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 KCNA2P16389 499 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 NAPAP54920 295 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 DUS1LQ6P1R4 473 aaKnown RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 SYT2Q8N9I0 419 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 GM2AP17900 193 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
LDLRAD3-201ENST00000315571 IYDQ6PHW0 289 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms