RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PPHLN1Q8NEY8 458 aaKnown RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 WTIPA6NIX2 430 aaPredicted RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 OGTO15294 1046 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 KRT14P02533 472 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 MPZL3Q6UWV2 235 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 METTL5Q9NRN9 209 aaKnown RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 WDR35Q9P2L0 1181 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 MSRAQ9UJ68 235 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 PCDHAC2Q9Y5I4 1007 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ADGRF2Q8IZF7 708 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ARHGAP18Q8N392 663 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 RSRC1Q96IZ7 334 aaKnown RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 TMEM117Q9H0C3 514 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 C3orf70A6NLC5 250 aaPredicted RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 MED24O75448 989 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 KITP10721 976 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 PTPRAP18433 802 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 SLC26A2P50443 739 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ZNF177Q13360 481 aaPredicted RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 TRIM59Q8IWR1 403 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 TLR2O60603 784 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 AVPR1AP37288 418 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 PSEN2P49810 448 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 TSNAXIP1Q2TAA8 658 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 TRAPPC12Q8WVT3 735 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 FOPNLQ96NB1 174 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 TSSK1BQ9BXA7 367 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 C17orf75Q9HAS0 396 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 VTA1Q9NP79 307 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 TIMM13Q9Y5L4 95 aaPredicted RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 SLIT1O75093 1534 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 SLC26A4O43511 780 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 ENDOD1O94919 500 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 MEI1Q5TIA1 1274 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 BCAS4Q8TDM0 211 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 NOVA2Q9UNW9 492 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 TGFB3P10600 412 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 LRRC43Q8N309 656 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 PGLYRP2Q96PD5 576 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 MFSD1Q9H3U5 465 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 CCDC188H7C350 402 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 MAP3K7CLP57077 242 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 DPYDQ12882 1025 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 FASTKD1Q53R41 847 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 GJC2Q5T442 439 aaPredicted RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 ACBD5Q5T8D3 534 aaPredicted RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 CARNMT1Q8N4J0 409 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 THOC1Q96FV9 657 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 ITIH6Q6UXX5 1313 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 ASS1P00966 412 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 CCL23P55773 120 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 TMPRSS15P98073 1019 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 UCMAQ8WVF2 138 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 RFFLQ8WZ73 363 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 PDGFDQ9GZP0 370 aaPredicted RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 SUN2Q9UH99 717 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 ORC6Q9Y5N6 252 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 MYO9BQ13459 2157 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 CCDC195A0A1B0GUA6 201 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 KRT38O76015 456 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 RPLP2P05387 115 aaKnown RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 ACADMP11310 421 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 KPNA1P52294 538 aaPredicted RBP14.19□□□□□ -0.14
RFFL-201ENST00000315249 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
RFFL-201ENST00000315249 NPTX2P47972 431 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 PIGHQ14442 188 aaPredicted RBP14.18□□□□□ -0.14
RFFL-201ENST00000315249 FAM171A1Q5VUB5 890 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 ATG16L1Q676U5 607 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 ATP6V0D2Q8N8Y2 350 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CENPKQ9BS16 269 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CIPCQ9C0C6 399 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 UCHL3P15374 230 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CCT5P48643 541 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CCDC137Q6PK04 289 aaKnown RBP14.18□□□□□ -0.14
RFFL-201ENST00000315249 CRLF3Q8IUI8 442 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 TRIM48Q8IWZ4 208 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 DDI1Q8WTU0 396 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CASS4Q9NQ75 786 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 NDUFS3O75489 264 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CDR2Q01850 454 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 COBLL1Q53SF7 1204 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 ZBTB41Q5SVQ8 909 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 RPRD1AQ96P16 312 aaPredicted RBP14.18□□□□□ -0.14
RFFL-201ENST00000315249 M0QYT0 321 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CKBP12277 381 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 RAP1GAPP47736 663 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 APBA1Q02410 837 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms