RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CAGE1Q8TC20 777 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 ANKZF1Q9H8Y5 726 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 COG5Q9UP83 839 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 SEPT4O43236 478 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CYP1A2P05177 515 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 C6orf222P0C671 652 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 GNAT1P11488 350 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 FGFR4P22455 802 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CXCR5P32302 372 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 ASPAP45381 313 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 PRKCZQ05513 592 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 PEX26Q7Z412 305 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 NT5DC4Q86YG4 428 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 ACAP3Q96P50 834 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 PSMB7Q99436 277 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 OSMRQ99650 979 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 GOLPH3Q9H4A6 298 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 PACSIN2Q9UNF0 486 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 C2CD2Q9Y426 696 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CALCAP01258 141 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 EIF4BP23588 611 aaKnown RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 AXLP30530 894 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 GNA15P30679 374 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 ZNF200P98182 395 aaPredicted RBP12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CENPCQ03188 943 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 SNX17Q15036 470 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 C11orf63Q6NUN7 778 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 SLC27A1Q6PCB7 646 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 DAAM2Q86T65 1068 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 CD302Q8IX05 232 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 NME8Q8N427 588 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 HES6Q96HZ4 224 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 PARD6BQ9BYG5 372 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 BCO2Q9BYV7 579 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 RAB21Q9UL25 225 aa12.7□□□□□ -0.38
TRIM40-205ENST00000307859 ADAMTS4O75173 837 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 NPTXRO95502 500 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 ATICP31939 592 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 PAFAH1B1P43034 410 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CLCN6P51797 869 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 YWHAEP62258 255 aaKnown RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 TMEM132DQ14C87 1099 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 GNASQ5JWF2 1037 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CCDC181Q5TID7 509 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 MMGT1Q8N4V1 131 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 ZNF653Q96CK0 615 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 PBKQ96KB5 322 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CCDC94Q9BW85 323 aaPredicted RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 PLEKHA5Q9HAU0 1116 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 AVENQ9NQS1 362 aaPredicted RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CISHQ9NSE2 258 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 ARGLU1Q9NWB6 273 aaPredicted RBP12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CTTNBP2NLQ9P2B4 639 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 UVRAGQ9P2Y5 699 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 DERAQ9Y315 318 aa12.69□□□□□ -0.38
TRIM40-205ENST00000307859 CLSTN1O94985 981 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 ITGB3P05106 788 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 TUBBP07437 444 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 MYBL1P10243 752 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 RARBP10826 455 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 COL9A1P20849 921 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 NOMO3P69849 1222 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 CACNB2Q08289 660 aaPredicted RBP12.68□□□□□ -0.38
TRIM40-205ENST00000307859 C2orf54Q08AI8 447 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 TRIM32Q13049 653 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 ZNF667Q5HYK9 610 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 PPP1R2P3Q6NXS1 205 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 TMEM40Q8WWA1 233 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 SNX27Q96L92 541 aa12.68□□□□□ -0.38
TRIM40-205ENST00000307859 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms