RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DPH5Q9H2P9 285 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 ENC1O14682 589 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 KRT15P19012 456 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 SLC9A1P19634 815 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 MLH1P40692 756 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 ETF1P62495 437 aaKnown RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 ASAP3Q8TDY4 903 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 KIAA1257Q9ULG3 409 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 RGPD1P0DJD0 1748 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 MIF4GDA9UHW6 222 aaKnown RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 GLRA2P23416 452 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 CASP4P49662 377 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 YWHAGP61981 247 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 GFPT1Q06210 699 aaPredicted RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 ZNF467Q7Z7K2 595 aaPredicted RBP9.8□□□□□ -0.84
PTPRE-202ENST00000306042 FAM107BQ9H098 131 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 PCDHB5Q9Y5E4 795 aa9.8□□□□□ -0.84
PTPRE-202ENST00000306042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ADCY6O43306 1168 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 MBL2P11226 248 aaPredicted RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 NCAM1P13591 858 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SERPINB6P35237 376 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 TPI1P60174 286 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 DEUP1Q05D60 604 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PLD1Q13393 1074 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ZNF235Q14590 738 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 DCAF6Q58WW2 860 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PPM1LQ5SGD2 360 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 NT5DC4Q86YG4 428 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SLC35F6Q8N357 371 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 TTC13Q8NBP0 860 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 HELQQ8TDG4 1101 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SCFD1Q8WVM8 642 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 CPA5Q8WXQ8 436 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 IFT43Q96FT9 208 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 TRIM7Q9C029 511 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 DDX43Q9NXZ2 648 aaKnown RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 STK39Q9UEW8 545 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 KDM3BQ7LBC6 1761 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PODXLO00592 558 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 MAP3K7O43318 606 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ICAM3P32942 547 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PPARGP37231 505 aaPredicted RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 MYBPC2Q14324 1141 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PREPLQ4J6C6 727 aaPredicted RBP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SARM1Q6SZW1 724 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ABHD15Q6UXT9 468 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 CROCCP2Q86T23 111 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SLC7A14Q8TBB6 771 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ARFGEF2Q9Y6D5 1785 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRE-202ENST00000306042 TREHO43280 583 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 RTN2O75298 545 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 SAT1P21673 171 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 OLFML2BQ68BL8 750 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 CLEC17AQ6ZS10 378 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 CHSY1Q86X52 802 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 APBB2Q92870 758 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 PBKQ96KB5 322 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 FSD1LQ9BXM9 530 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 MORF4L1Q9UBU8 362 aa9.79□□□□□ -0.84
PTPRE-202ENST00000306042 ECEL1O95672 775 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CDH6P55285 790 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MYL6P60660 151 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MMS22LQ6ZRQ5 1243 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 SLC30A5Q8TAD4 765 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CYFIP2Q96F07 1278 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 SYT15Q9BQS2 421 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 FHOD1Q9Y613 1164 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 LACTBL1A8MY62 500 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 GRAP2O75791 330 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 TLE2Q04725 743 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 ARFGAP2Q8N6H7 521 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 ETNPPLQ8TBG4 499 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 NSRP1Q9H0G5 558 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CYP3A43Q9HB55 503 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CHST12Q9NRB3 414 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 COL20A1Q9P218 1284 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 JRKLQ9Y4A0 524 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 SF3B1O75533 1304 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 DUOX1Q9NRD9 1551 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 THOC5Q13769 683 aaKnown RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 GRB14Q14449 540 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 MAP4K3Q8IVH8 894 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 CCHCR1Q8TD31 782 aa9.78□□□□□ -0.84
PTPRE-202ENST00000306042 RNF25Q96BH1 459 aaPredicted RBP9.78□□□□□ -0.84
PTPRE-202ENST00000306042 ZBTB45Q96K62 511 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms