RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 SNRNP35Q16560 246 aaKnown RBP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 XKR3Q5GH77 459 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 THEMIS2Q5TEJ8 643 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 KIF2BQ8N4N8 673 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 KCTD17Q8N5Z5 321 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 RNF149Q8NC42 400 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 MED15Q96RN5 788 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 FRMD8Q9BZ67 464 aaPredicted RBP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 GID8Q9NWU2 228 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 FAM32AQ9Y421 112 aaKnown RBP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 KDM7AQ6ZMT4 941 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 E2F7Q96AV8 911 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 ELMO2Q96JJ3 720 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 RSAD1Q9HA92 442 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 PCDHB2Q9Y5E7 798 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 ALG6Q9Y672 507 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 KDM6BO15054 1643 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 REREQ9P2R6 1566 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 EIF3DO15371 548 aaKnown RBP eCLIP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 HSPA13P48723 471 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SBK1Q52WX2 424 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF677Q86XU0 584 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 DDX50Q9BQ39 737 aaKnown RBP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SMARCAL1Q9NZC9 954 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SYNDIG1LA6NDD5 238 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 LRRIQ3A6PVS8 624 aaPredicted RBP20.82■□□□□ 0.92
CTNND2-201ENST00000304623 NCOA4Q13772 614 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 DCAF4L1Q3SXM0 396 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 MFN1Q8IWA4 741 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 AGAP3Q96P47 875 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 CCT7Q99832 543 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SEPT3Q9UH03 358 aa20.82■□□□□ 0.92
CTNND2-201ENST00000304623 SERPINB3P29508 390 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 SPP2Q13103 211 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 TJAP1Q5JTD0 557 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 USP6NLQ92738 828 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 ERGIC2Q96RQ1 377 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 TJP2Q9UDY2 1190 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 SFMBT1Q9UHJ3 866 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 TSR3Q9UJK0 312 aaKnown RBP20.81■□□□□ 0.92
CTNND2-201ENST00000304623 PLA2G4AP47712 749 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 DEFA1P59665 94 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 DEFA3P59666 94 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 GRIN1Q05586 938 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF543Q08ER8 600 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 PDP2Q9P2J9 529 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 HIST1H2AGP0C0S8 130 aaPredicted RBP20.81■□□□□ 0.92
CTNND2-201ENST00000304623 HIST1H2ADP20671 130 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 WLSQ5T9L3 541 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 CALML6Q8TD86 181 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 HIST1H2AHQ96KK5 128 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 HIST1H2AJQ99878 128 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 H2AFJQ9BTM1 129 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 C21orf2O43822 256 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 CSPG5O95196 566 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 COBLL1Q53SF7 1204 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 FASTKD5Q7L8L6 764 aaKnown RBP20.81■□□□□ 0.92
CTNND2-201ENST00000304623 PRPF39Q86UA1 669 aaKnown RBP20.81■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF556Q9HAH1 456 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 AGAP1Q9UPQ3 857 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF609O15014 1411 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 HNRNPH1P31943 449 aaKnown RBP20.81■□□□□ 0.92
CTNND2-201ENST00000304623 STAT5BP51692 787 aa20.81■□□□□ 0.92
CTNND2-201ENST00000304623 POLBP06746 335 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 SLC9A1P19634 815 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 COILP38432 576 aaPredicted RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ANKS3Q6ZW76 656 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF668Q96K58 619 aaPredicted RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 MMP19Q99542 508 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 NOD2Q9HC29 1040 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 PRPF4O43172 522 aaKnown RBP eCLIP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 DCUN1D1Q96GG9 259 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 C5orf58C9J3I9 102 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 RUNX1T1Q06455 604 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 GALNT4Q8N4A0 578 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ZNF507Q8TCN5 953 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 SCFD2Q8WU76 684 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 NSUN4Q96CB9 384 aaKnown RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 MTMR4Q9NYA4 1195 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ITM2BQ9Y287 266 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ADRA2BP18089 450 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 FNTAP49354 379 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 SLC29A2Q14542 456 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 EFL1Q7Z2Z2 1120 aaKnown RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 PPIL6Q8IXY8 311 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 RAB42Q8N4Z0 105 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 ATPAF2Q8N5M1 289 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
CTNND2-201ENST00000304623 MOV10L1Q9BXT6 1211 aaKnown RBP20.8■□□□□ 0.92
CTNND2-201ENST00000304623 MYBP10242 640 aa20.79■□□□□ 0.92
CTNND2-201ENST00000304623 ACCSLQ4AC99 568 aa20.79■□□□□ 0.92
CTNND2-201ENST00000304623 SYCP2LQ5T4T6 812 aa20.79■□□□□ 0.92
CTNND2-201ENST00000304623 KLHDC7AQ5VTJ3 777 aa20.79■□□□□ 0.92
CTNND2-201ENST00000304623 CELF4Q9BZC1 486 aaKnown RBP20.79■□□□□ 0.92
CTNND2-201ENST00000304623 M0R3G1 203 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms