RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 NOTUMQ6P988 496 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 FBXO38Q6PIJ6 1188 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 RUFY4Q6ZNE9 571 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 PEX26Q7Z412 305 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 CDR2LQ86X02 465 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 COG1Q8WTW3 980 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 TRIB2Q92519 343 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 HES6Q96HZ4 224 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 VCPIP1Q96JH7 1222 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 PPP1R16BQ96T49 567 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 SELENOOQ9BVL4 669 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 FAM49AQ9H0Q0 323 aaPredicted RBP12.83□□□□□ -0.36
TPM3-202ENST00000302206 CYP3A43Q9HB55 503 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 AMFRQ9UKV5 643 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 ITGA11Q9UKX5 1188 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 RAB21Q9UL25 225 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 GABRQQ9UN88 632 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 UMODL1Q5DID0 1318 aa12.83□□□□□ -0.36
TPM3-202ENST00000302206 ZNF185O15231 689 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
TPM3-202ENST00000302206 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
TPM3-202ENST00000302206 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
TPM3-202ENST00000302206 TFRCP02786 760 aaKnown RBP12.82□□□□□ -0.36
TPM3-202ENST00000302206 NFICP08651 508 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 MCM3P25205 808 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 GNA15P30679 374 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 OSTNP61366 133 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 CENPCQ03188 943 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 HIC1Q14526 733 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 TMEM132DQ14C87 1099 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 TMEM270Q6UE05 265 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 DNAAF5Q86Y56 855 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 TTC39CQ8N584 583 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 C7orf31Q8N865 590 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 DNAJB3Q8WWF6 145 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 RPS6KC1Q96S38 1066 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 PARD6BQ9BYG5 372 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 PRO3102Q9H379 93 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 ANKZF1Q9H8Y5 726 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 CTTNBP2NLQ9P2B4 639 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 SIX4Q9UIU6 781 aa12.82□□□□□ -0.36
TPM3-202ENST00000302206 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 TREHO43280 583 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 NPTXRO95502 500 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 LSM8O95777 96 aaKnown RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 C6orf222P0C671 652 aaPredicted RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 RARBP10826 455 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 P4HA1P13674 534 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 HOXD10P28358 340 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ASPAP45381 313 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 RBP5P82980 135 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 PRKCZQ05513 592 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 SNX17Q15036 470 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 MTFR1Q15390 333 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 CLUL1Q15846 466 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 WDR93Q6P2C0 686 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 RPAINQ86UA6 219 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 PHF13Q86YI8 300 aaPredicted RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 RASGEF1CQ8N431 466 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 NOA1Q8NC60 698 aaKnown RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 SPATA4Q8NEY3 305 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ACTRT1Q8TDG2 376 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 HNRNPLLQ8WVV9 542 aaKnown RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 ELMO3Q96BJ8 720 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 OSGEPQ9NPF4 335 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 ACP6Q9NPH0 428 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 CISHQ9NSE2 258 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
TPM3-202ENST00000302206 PCDHGC3Q9UN70 934 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 COG5Q9UP83 839 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
TPM3-202ENST00000302206 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 CCDC151A5D8V7 595 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 MYADML2A6NDP7 307 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 ATP8B1O43520 1251 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 PAEPP09466 180 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
TPM3-202ENST00000302206 NSFP46459 744 aaKnown RBP12.8□□□□□ -0.36
TPM3-202ENST00000302206 YARSP54577 528 aaKnown RBP12.8□□□□□ -0.36
TPM3-202ENST00000302206 NOMO3P69849 1222 aa12.8□□□□□ -0.36
TPM3-202ENST00000302206 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms