RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SNTG2Q9NY99 539 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 CNOT8Q9UFF9 292 aaKnown RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 C2CD2Q9Y426 696 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 CRYBB1P53674 252 aaPredicted RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 NKX3-2P78367 333 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 SP3Q02447 781 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 BRD3Q15059 726 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 WDR72Q3MJ13 1102 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 PASD1Q8IV76 773 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 RBM12Q9NTZ6 932 aaKnown RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 UVRAGQ9P2Y5 699 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 CEP104O60308 925 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 ATICP31939 592 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 NOMO3P69849 1222 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 NBPF20Q3BBV1 942 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 ZNF394Q53GI3 561 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 ZNF564Q8TBZ8 553 aaPredicted RBP23.79■■□□□ 1.4
SMAD1-201ENST00000302085 SDCBP2Q9H190 292 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 PLEKHA5Q9HAU0 1116 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 DPP3Q9NY33 737 aa23.79■■□□□ 1.4
SMAD1-201ENST00000302085 TMEM110-MUSTN1A8MSY1 372 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 AXLP30530 894 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 POLR2BP30876 1174 aaKnown RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 NSFP46459 744 aaKnown RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 RAP1GAPP47736 663 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 VSNL1P62760 191 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 MESDQ14696 234 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 SMYD5Q6GMV2 418 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 CC2D1AQ6P1N0 951 aaPredicted RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 NT5DC4Q86YG4 428 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 KIF12Q96FN5 646 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 FAXDC2Q96IV6 333 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 SELENOOQ9BVL4 669 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 VRTNQ9H8Y1 702 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 AGAP1Q9UPQ3 857 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 HES2Q9Y543 173 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 RARBP10826 455 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 BRD2P25440 801 aaKnown RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 CCND3P30281 292 aaPredicted RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 CDH8P55286 799 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 TMCO3Q6UWJ1 677 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 MON1BQ7L1V2 547 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 ACTRT1Q8TDG2 376 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 BTBD6Q96KE9 485 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 AVENQ9NQS1 362 aaPredicted RBP23.78■■□□□ 1.4
SMAD1-201ENST00000302085 ITGA11Q9UKX5 1188 aa23.78■■□□□ 1.4
SMAD1-201ENST00000302085 TARSL2A2RTX5 802 aaKnown RBP23.77■■□□□ 1.4
SMAD1-201ENST00000302085 CCDC151A5D8V7 595 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 SEC31AO94979 1220 aaKnown RBP23.77■■□□□ 1.4
SMAD1-201ENST00000302085 ELNP15502 786 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 YWHAEP62258 255 aaKnown RBP23.77■■□□□ 1.4
SMAD1-201ENST00000302085 WDR93Q6P2C0 686 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 USP38Q8NB14 1042 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 TFAP2BQ92481 460 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 HPDLQ96IR7 371 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 SNX27Q96L92 541 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 RPS6KC1Q96S38 1066 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 LRRC1Q9BTT6 524 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 SPC25Q9HBM1 224 aa23.77■■□□□ 1.4
SMAD1-201ENST00000302085 ADAMTS4O75173 837 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 ZRANB2O95218 330 aaKnown RBP eCLIP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 MYBL1P10243 752 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 COMTP21964 271 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 RRM1P23921 792 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 RBP5P82980 135 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 C2CD6Q53TS8 623 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 TAF2Q6P1X5 1199 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 PHLDB2Q86SQ0 1253 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 PHF13Q86YI8 300 aaPredicted RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 REM2Q8IYK8 340 aaPredicted RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 RASGEF1CQ8N431 466 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 ZMAT2Q96NC0 199 aaKnown RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 CELF4Q9BZC1 486 aaKnown RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 SMYD3Q9H7B4 428 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 GTF2IRD1Q9UHL9 959 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 PIN4Q9Y237 131 aaKnown RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 CITO14578 2027 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 TUBBP07437 444 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 UBXN11Q5T124 520 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 GDF6Q6KF10 455 aaPredicted RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 LLGL2Q6P1M3 1020 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 ALKAL1Q6UXT8 129 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 TRIM11Q96F44 468 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 NXF3Q9H4D5 531 aaKnown RBP23.76■■□□□ 1.39
SMAD1-201ENST00000302085 TMEM59LQ9UK28 342 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 DERAQ9Y315 318 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
SMAD1-201ENST00000302085 PTP4A2Q12974 167 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 ZBTB6Q15916 424 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 DCAF12L1Q5VU92 463 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 CPNE8Q86YQ8 564 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 WHAMMQ8TF30 809 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 ALG3Q92685 438 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 XPNPEP3Q9NQH7 507 aa23.75■■□□□ 1.39
SMAD1-201ENST00000302085 MRPS25P82663 173 aaKnown RBP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 HDAC7Q8WUI4 952 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 HNRNPLLQ8WVV9 542 aaKnown RBP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 VCPIP1Q96JH7 1222 aa23.74■■□□□ 1.39
SMAD1-201ENST00000302085 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMAD1-201ENST00000302085 C11orf70Q9BRQ4 267 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms