RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MAPK13O15264 365 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 UBA1P22314 1058 aaKnown RBP16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 ZNF568Q3ZCX4 644 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 ACAD10Q6JQN1 1059 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 GLIS1Q8NBF1 620 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 ST6GALNAC4Q9H4F1 302 aa16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHAF1A-201ENST00000301280 EIF4E1BA6NMX2 242 aaKnown RBP16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 VTNP04004 478 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 ATP11AP98196 1134 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 E2F5Q15329 346 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 GLRA4Q5JXX5 417 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 GPAT2Q6NUI2 795 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 HAPLN2Q9GZV7 340 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 HOXC10Q9NYD6 342 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 GMNCA6NCL1 334 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 SRRM3A6NNA2 597 aaPredicted RBP16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 OATP04181 439 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 SUPT20HL2P0C7V6 817 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 KRT15P19012 456 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 ATP4AP20648 1035 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 ZC3H18Q86VM9 953 aaKnown RBP16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
CHAF1A-201ENST00000301280 LYPLA2O95372 231 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 MTMR3Q13615 1198 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 BSPRYQ5W0U4 402 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 KDM7AQ6ZMT4 941 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 FMNL3Q8IVF7 1028 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 C4orf33Q8N1A6 199 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 TMEM121Q9BTD3 319 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 EPN3Q9H201 632 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 SAYSD1Q9NPB0 183 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 STK38LQ9Y2H1 464 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 A6NNZ2 444 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 CXCL8P10145 99 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 TUBB8Q3ZCM7 444 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 NUGGCQ68CJ6 796 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 MCOLN2Q8IZK6 566 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 TBC1D31Q96DN5 1066 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 C12orf65Q9H3J6 166 aaKnown RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 CDC42EP4Q9H3Q1 356 aaKnown RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 GAS8O95995 478 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 P3H1Q32P28 736 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 ARHGEF2Q92974 986 aaKnown RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
CHAF1A-201ENST00000301280 MEFVO15553 781 aaPredicted RBP16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 GH1P01241 217 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 NCKAP1LP55160 1127 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 GPS1Q13098 491 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 CUL2Q13617 745 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 FAXCQ5TGI0 409 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 EEF1DP3Q658K8 133 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 GEMIN8Q9NWZ8 242 aaKnown RBP16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 H0YGN5 161 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 CHRNA3P32297 505 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 CAPSQ13938 189 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 CACNA2D3Q8IZS8 1091 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 GPATCH11Q8N954 259 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 TCP11Q8WWU5 503 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 NRBP2Q9NSY0 501 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 NFS1Q9Y697 457 aa16.54■□□□□ 0.24
CHAF1A-201ENST00000301280 MIF4GDA9UHW6 222 aaKnown RBP16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 ARIH2O95376 493 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 CLTAP09496 248 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 ZNF286BP0CG31 522 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 TXNP10599 105 aaKnown RBP16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 DUPD1Q68J44 220 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 NCAPGQ9BPX3 1015 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 OSBPL8Q9BZF1 889 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 CD248Q9HCU0 757 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 DIS3Q9Y2L1 958 aaKnown RBP16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 PCDHB2Q9Y5E7 798 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 P4HA2O15460 535 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 IZUMO3Q5VZ72 239 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 CCDC13Q8IYE1 715 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 LRRC34Q8IZ02 419 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
CHAF1A-201ENST00000301280 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms