RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 MAGEB2O15479 319 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 RNASEH1O60930 286 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 FAM200BP0CF97 657 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ATF7P17544 494 aaPredicted RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ALYREFQ86V81 257 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 CCDC89Q8N998 374 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 CPA5Q8WXQ8 436 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 P2RX7Q99572 595 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ZMYM2Q9UBW7 1377 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 LDHCP07864 332 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 MYL2P10916 166 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 SSTR1P30872 391 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 CLK2P49760 499 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 DSG1Q02413 1049 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 PDIA2Q13087 525 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 GPS1Q13098 491 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ITPK1Q13572 414 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 MYBPC3Q14896 1274 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 C1orf146Q5VVC0 180 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 TSSK1BQ9BXA7 367 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 MANSC1Q9H8J5 431 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 C10orf88Q9H8K7 445 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 NDE1Q9NXR1 346 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ATXN10Q9UBB4 475 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 COL18A1P39060 1754 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ANPEPP15144 967 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 RASA3Q14644 834 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ATP13A4Q4VNC1 1196 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 SYCP2LQ5T4T6 812 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 RASSF3Q86WH2 238 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 SHKBP1Q8TBC3 707 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 CCDC97Q96F63 343 aaPredicted RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 NMUR2Q9GZQ4 415 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 FAM192AQ9GZU8 254 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 ZWILCHQ9H900 591 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 RMI1Q9H9A7 625 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 LARSQ9P2J5 1176 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 PPARGC1AQ9UBK2 798 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 SMG5Q9UPR3 1016 aaKnown RBP11.6□□□□□ -0.55
SNX20-201ENST00000300590 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
SNX20-201ENST00000300590 FCHO1O14526 889 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SORBS3O60504 671 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 TCEA3O75764 348 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 MUTP22033 750 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 GSTO1P78417 241 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 FMO1Q01740 532 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SPIRE1Q08AE8 756 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SATL1Q86VE3 508 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SPATA24Q86W54 205 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ACSF2Q96CM8 615 aaPredicted RBP11.59□□□□□ -0.55
SNX20-201ENST00000300590 ECSITQ9BQ95 431 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 TLE6Q9H808 572 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 PKD2L1Q9P0L9 805 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ZNF212Q9UDV6 495 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 PPM1HQ9ULR3 514 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ZNF652Q9Y2D9 606 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 MROH7Q68CQ1 1323 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 hCG_1984214I3L0E3 225 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 HARSP12081 509 aaKnown RBP11.59□□□□□ -0.55
SNX20-201ENST00000300590 BGNP21810 368 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 PSMC4P43686 418 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ARSEP51690 589 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ARL4CP56559 192 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 CAV1Q03135 178 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
SNX20-201ENST00000300590 DDB1Q16531 1140 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 RIPOR1Q6ZS17 1223 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ZNF713Q8N859 430 aaPredicted RBP11.59□□□□□ -0.55
SNX20-201ENST00000300590 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 PYDC1Q8WXC3 89 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 CBWD1Q9BRT8 395 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
SNX20-201ENST00000300590 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 COQ9O75208 318 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 CIB2O75838 187 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 SMARCA1P28370 1054 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 VAMP7P51809 220 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 SIK1P57059 783 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 GAD2Q05329 585 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 C6orf163Q5TEZ5 329 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 LPCAT4Q643R3 524 aa11.58□□□□□ -0.55
SNX20-201ENST00000300590 ZNF720Q7Z2F6 126 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms