RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SCFD1Q8WVM8 642 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 GPRC5DQ9NZD1 345 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 RAG1P15918 1043 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 TNFRSF8P28908 595 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 RXRGP48443 463 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 XIAPP98170 497 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 STAT4Q14765 748 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 ATAD3BQ5T9A4 648 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
SNIP1-201ENST00000296215 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 BTN3A3O00478 584 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ARHGEF15O94989 841 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 IFNA14P01570 189 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 STAT1P42224 750 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 CLK1P49759 484 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 RAD23AP54725 363 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 SNX16P57768 344 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 PLOD1Q02809 727 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 BFSP2Q13515 415 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 MTFR1Q15390 333 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 NEDD8Q15843 81 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 C4orf33Q8N1A6 199 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 POLR3BQ9NW08 1133 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 TTLL3Q9Y4R7 772 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 FLT1P17948 1338 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 TIGD2Q4W5G0 525 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 HTRA1Q92743 480 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 TTC25Q96NG3 672 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ABCB10Q9NRK6 738 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 STX7O15400 261 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 PHGDHO43175 533 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ICMTO60725 284 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ATXN3P54252 364 aaPredicted RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 TNFAIP2Q03169 654 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 COX10Q12887 443 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 LLGL1Q15334 1064 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 NADK2Q4G0N4 442 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 KCNK18Q7Z418 384 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 METTL16Q86W50 562 aaKnown RBP12.29□□□□□ -0.44
SNIP1-201ENST00000296215 CREG2Q8IUH2 290 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 SLC15A3Q8IY34 581 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 CALN1Q9BXU9 219 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
SNIP1-201ENST00000296215 FAM135AQ9P2D6 1515 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 PSTPIP1O43586 416 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 IL1RL1Q01638 556 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 NFIAQ12857 509 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 GPR107Q5VW38 600 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 SH3BP5LQ7L8J4 393 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 PRUNE1Q86TP1 453 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 NELFCDQ8IXH7 590 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ORC6Q9Y5N6 252 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CAPN6Q9Y6Q1 641 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 A0A0G2JPF8 293 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 hCG_1642624A0A1W2PR95 340 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 TRPC5OSA6NMA1 111 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 HNRNPCL3B7ZW38 293 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 PEX1O43933 1283 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 HNRNPCL4P0DMR1 293 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CHRNA3P32297 505 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CENPAP49450 140 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 MYLK3Q32MK0 819 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 WDR12Q9GZL7 423 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 GNPTGQ9UJJ9 305 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 WBP11Q9Y2W2 641 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 COPG1Q9Y678 874 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 FGD5Q6ZNL6 1462 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 FOXN1O15353 648 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ZBED4O75132 1171 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 IFI30P13284 250 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 NFE2L1Q14494 772 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ZNF285Q96NJ3 590 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 PABPC1P11940 636 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 MYCLP12524 364 aaPredicted RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CCNA2P20248 432 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
SNIP1-201ENST00000296215 EVA1CP58658 441 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 IRF5Q13568 498 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 CNGA2Q16280 664 aa12.28□□□□□ -0.44
SNIP1-201ENST00000296215 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms