RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 CD101Q93033 1021 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 LRRC45Q96CN5 670 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 HINFPQ9BQA5 517 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 EFCC1Q9HA90 598 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MRPL47Q9HD33 250 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ACP6Q9NPH0 428 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PRMT7Q9NVM4 692 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 MORF4L1Q9UBU8 362 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 RASAL2Q9UJF2 1139 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 FAN1Q9Y2M0 1017 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLRN1-201ENST00000295911 IVNS1ABPQ9Y6Y0 642 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 PTPRJQ12913 1337 aa9.88□□□□□ -0.83
CLRN1-201ENST00000295911 TMEM110-MUSTN1A8MSY1 372 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 AGPSO00116 658 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 B4GALT4O60513 344 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ASS1P00966 412 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TNNC2P02585 160 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 EDN1P05305 212 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TMOD1P28289 359 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 GNA15P30679 374 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 CHRNA3P32297 505 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 HSPA9P38646 679 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 PHKA2P46019 1235 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 DRG2P55039 364 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 WNT7BP56706 349 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 RWDD2BP57060 319 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TNFAIP2Q03169 654 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ARHGAP1Q07960 439 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TRPC3Q13507 836 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 HLTFQ14527 1009 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ZBTB41Q5SVQ8 909 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TAPT1Q6NXT6 567 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TMEM270Q6UE05 265 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TRIM50Q86XT4 487 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 CD302Q8IX05 232 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 RBBP8NLQ8NC74 664 aaPredicted RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 OR5B17Q8NGF7 314 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ALG3Q92685 438 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ANKRD36BP1Q96IX9 119 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 GDAP1L1Q96MZ0 367 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 APOBEC3GQ9HC16 384 aaKnown RBP9.87□□□□□ -0.83
CLRN1-201ENST00000295911 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 TNFSF13BQ9Y275 285 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 SCINQ9Y6U3 715 aa9.87□□□□□ -0.83
CLRN1-201ENST00000295911 ZNF236Q9UL36 1845 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 A6NNZ2 444 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 INO80B-WBP1J3KQ70 363 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 MYO1FO00160 1098 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PODXLO00592 558 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ABLIM1O14639 778 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PHF2O75151 1096 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 LSM8O95777 96 aaKnown RBP9.86□□□□□ -0.83
CLRN1-201ENST00000295911 CYP2C8P10632 490 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ITGA4P13612 1032 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ADORA2AP29274 412 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 DR1Q01658 176 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PTP4A2Q12974 167 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 TUBB8Q3ZCM7 444 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ZNF568Q3ZCX4 644 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 SPDYCQ5MJ68 293 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 NAA35Q5VZE5 725 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 SPOPLQ6IQ16 392 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 MAMDC4Q6UXC1 1216 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 IQCKQ8N0W5 287 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 C1orf131Q8NDD1 294 aaKnown RBP9.86□□□□□ -0.83
CLRN1-201ENST00000295911 COPS5Q92905 334 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 NLRP4Q96MN2 994 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 FAM129AQ9BZQ8 928 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ZNF518BQ9C0D4 1074 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 RPF1Q9H9Y2 349 aaKnown RBP9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PDGFCQ9NRA1 345 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PARP2Q9UGN5 583 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 PCYOX1Q9UHG3 505 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 AMACRQ9UHK6 382 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 ANAPC7Q9UJX3 599 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
CLRN1-201ENST00000295911 CCL15-CCL14A0A0B4J2E2 113 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 ESYT3A0FGR9 886 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 GOLGA6CA6NDK9 693 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 ZSCAN5CA6NGD5 496 aaPredicted RBP9.85□□□□□ -0.83
CLRN1-201ENST00000295911 BTBD19C9JJ37 291 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 TTI1O43156 1089 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 THAP12O43422 761 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 ZEB2O60315 1214 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 C22orf31O95567 290 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 LGALS2P05162 132 aa9.85□□□□□ -0.83
CLRN1-201ENST00000295911 FAM153BP0C7A2 387 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms